Strain Fitness in Escherichia coli BW25113 around b4426

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,402,834	-				+0.4
1,402,988	+	abgR	b1339	0.25	+0.2
1,403,075	+	abgR	b1339	0.34	+0.0
1,403,075	+	abgR	b1339	0.34	+0.9
1,403,087	+	abgR	b1339	0.35	-0.7
1,403,087	+	abgR	b1339	0.35	+0.4
1,403,109	-	abgR	b1339	0.38	+1.1
1,403,119	-	abgR	b1339	0.39	+0.4
1,403,119	-	abgR	b1339	0.39	+0.7
1,403,153	-	abgR	b1339	0.43	-0.1
1,403,153	-	abgR	b1339	0.43	+0.0
1,403,464	-	abgR	b1339	0.77	+0.3
1,403,464	-	abgR	b1339	0.77	-0.4
1,403,519	-	abgR	b1339	0.83	+1.1
1,403,519	-	abgR	b1339	0.83	+0.4
1,403,720	+	isrA	b4426	0.28	+0.7
1,403,720	+	isrA	b4426	0.28	+0.2
1,403,732	-	isrA	b4426	0.35	+0.7
1,403,735	-	isrA	b4426	0.37	+0.4
1,404,417	-	ydaL	b1340	0.73	+1.3
1,404,648	+				+1.0
1,404,666	-				-0.1
1,404,686	-				-0.2