Strain Fitness in Escherichia coli BW25113 around b4294

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
4,515,584	-	fecR	b4292	0.84	+0.5
4,515,609	-	fecR	b4292	0.86	+0.1
4,515,647	+				-0.0
4,515,669	+				-0.5
4,515,669	+				+0.3
4,515,702	-				-0.5
4,515,749	+				+0.2
4,515,756	-				+0.1
4,515,760	+				+0.0
4,515,770	+				-0.6
4,515,852	-	fecI	b4293	0.22	+0.8
4,515,928	-	fecI	b4293	0.37	-0.0
4,515,928	-	fecI	b4293	0.37	-1.1
4,515,997	+	fecI	b4293	0.50	-1.7
4,516,053	+	fecI	b4293	0.61	+1.4
4,516,053	+	fecI	b4293	0.61	-0.3
4,516,059	+	fecI	b4293	0.62	-0.2
4,516,059	+	fecI	b4293	0.62	-0.2
4,516,067	-	fecI	b4293	0.63	+0.1
4,516,067	-	fecI	b4293	0.63	-0.3
4,516,111	-	fecI	b4293	0.72	-0.3
4,516,116	-	fecI	b4293	0.73	-1.5
4,516,135	-	fecI	b4293	0.76	-0.6
4,516,377	+				+0.0
4,516,417	+				-0.6
4,516,430	+				+0.4
4,516,456	+				-0.8
4,516,515	+				-0.5
4,516,515	+				-0.6
4,516,686	-	insA-7	b4294	0.49	+0.2
4,516,686	-	insA-7	b4294	0.49	+0.5
4,516,884	+	insB-7	b4576	0.28	-0.6
4,516,946	+	insB-7	b4576	0.40	-0.3
4,516,959	-	insB-7	b4576	0.43	-0.2
4,516,983	+	insB-7	b4576	0.47	-0.3
4,516,983	+	insB-7	b4576	0.47	-0.4
4,517,038	-	insB-7	b4576	0.58	+0.1
4,517,038	-	insB-7	b4576	0.58	+0.8
4,517,064	-	insB-7	b4576	0.63	-0.5
4,517,088	+	insB-7	b4576	0.68	-0.3
4,517,100	+	insB-7	b4576	0.71	+0.5
4,517,108	-	insB-7	b4576	0.72	+0.7
4,517,146	+	insB-7	b4576	0.80	+0.1
4,517,146	+	insB-7	b4576	0.80	+0.8
4,517,333	+				+0.3
4,517,341	-				+0.2
4,517,341	-				-0.5
4,517,341	-				+0.1
4,517,341	-				-0.5
4,517,377	-				+0.2
4,517,434	+				+0.2
4,517,439	-				-0.4
4,517,539	-	yjhU	b4295	0.18	+0.8
4,517,710	-	yjhU	b4295	0.35	+1.4
4,517,710	-	yjhU	b4295	0.35	-0.5
4,517,738	+	yjhU	b4295	0.38	-0.0
4,517,750	+	yjhU	b4295	0.39	-0.1
4,517,778	-	yjhU	b4295	0.42	+0.4
4,517,806	-	yjhU	b4295	0.45	+0.3
4,517,806	-	yjhU	b4295	0.45	+0.1