Strain Fitness in Escherichia coli BW25113 around b4279

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
4,501,108	+	insG	b4278	0.74	-0.7
4,501,263	-	insG	b4278	0.86	+0.1
4,501,263	-	insG	b4278	0.86	-0.9
4,501,275	+	insG	b4278	0.86	-0.6
4,501,287	-	insG	b4278	0.87	+0.1
4,501,432	+				+0.2
4,501,432	+				-1.5
4,501,498	+				+0.1
4,501,759	+				-0.4
4,501,759	+				-0.1
4,501,768	+				-0.3
4,501,768	+				-0.5
4,501,778	+				-0.2
4,501,778	+				+0.7
4,501,778	+				+1.0
4,501,799	+				+0.4
4,501,799	+				+0.5
4,501,821	+				-0.9
4,501,821	+				-0.5
4,501,821	+				+0.5
4,501,821	+				+0.9
4,501,821	+				-0.4
4,501,823	+				+0.3
4,501,826	+				-0.0
4,501,837	+				-0.5
4,501,875	+				+0.6
4,501,875	+				+0.8
4,501,887	+				-0.3
4,501,906	+				+0.2
4,501,914	+				-0.2
4,501,918	+				+0.1
4,501,918	+				+0.6
4,501,956	+				+0.8
4,501,956	+				+0.5
4,501,957	+				+0.6
4,501,957	+				-0.4
4,501,971	+				-0.2
4,501,974	+				-0.9
4,501,981	+				-0.2
4,502,265	-	yjhB	b4279	0.15	+1.8
4,502,276	-	yjhB	b4279	0.16	+1.6
4,502,363	+	yjhB	b4279	0.23	+2.8
4,502,794	+	yjhB	b4279	0.59	+2.8
4,503,626	+	yjhC	b4280	0.28	+3.2
4,503,638	+	yjhC	b4280	0.29	+0.0
4,503,647	+	yjhC	b4280	0.30	+0.3
4,503,648	+	yjhC	b4280	0.30	-0.3
4,503,648	+	yjhC	b4280	0.30	+1.8
4,503,814	+	yjhC	b4280	0.45	+0.5
4,503,826	+	yjhC	b4280	0.46	+2.8
4,503,830	+	yjhC	b4280	0.46	+2.3
4,503,900	+	yjhC	b4280	0.53	-1.8
4,503,911	+	yjhC	b4280	0.54	-0.2
4,503,911	+	yjhC	b4280	0.54	-0.3
4,503,985	+	yjhC	b4280	0.60	+0.8
4,503,985	+	yjhC	b4280	0.60	+0.8
4,503,986	+	yjhC	b4280	0.60	-0.2
4,503,990	+	yjhC	b4280	0.61	+1.0
4,503,991	+	yjhC	b4280	0.61	+0.5
4,503,991	+	yjhC	b4280	0.61	+2.0
4,503,999	-	yjhC	b4280	0.62	+1.8
4,504,003	+	yjhC	b4280	0.62	+0.3
4,504,018	+	yjhC	b4280	0.63	+0.2
4,504,084	-	yjhC	b4280	0.69	+0.3
4,504,085	+	yjhC	b4280	0.69	-0.3
4,504,086	+	yjhC	b4280	0.69	-1.5
4,504,086	+	yjhC	b4280	0.69	-0.2
4,504,091	+	yjhC	b4280	0.70	+1.1
4,504,138	+	yjhC	b4280	0.74	+1.2
4,504,159	+	yjhC	b4280	0.76	-0.3
4,504,159	+	yjhC	b4280	0.76	-1.4
4,504,174	+	yjhC	b4280	0.77	+0.3
4,504,184	+	yjhC	b4280	0.78	+0.5
4,504,184	+	yjhC	b4280	0.78	-0.1
4,504,187	+	yjhC	b4280	0.78	+0.3
4,504,187	+	yjhC	b4280	0.78	-0.5
4,504,191	+	yjhC	b4280	0.79	+0.4
4,504,191	+	yjhC	b4280	0.79	-0.3
4,504,191	+	yjhC	b4280	0.79	+0.5
4,504,191	+	yjhC	b4280	0.79	+0.6
4,504,191	+	yjhC	b4280	0.79	+1.5
4,504,221	+	yjhC	b4280	0.81	+0.5
4,504,268	+	yjhC	b4280	0.86	+0.1
4,504,277	-	yjhC	b4280	0.86	+1.8