Strain Fitness in Escherichia coli BW25113 around b2236
Experiment: Ying_AminoAcid20 rep A; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_AminoAcid20 rep A; time point 1 |
---|---|---|---|---|---|
remove | |||||
2,346,543 | + | -2.1 | |||
2,346,585 | - | yfaE | b2236 | 0.19 | +0.3 |
2,346,626 | - | yfaE | b2236 | 0.35 | +0.5 |
2,346,721 | - | yfaE | b2236 | 0.73 | +0.4 |
2,346,851 | + | -0.0 | |||
2,346,976 | - | inaA | b2237 | 0.20 | -0.5 |
2,347,083 | + | inaA | b2237 | 0.37 | -1.2 |
2,347,130 | + | inaA | b2237 | 0.44 | +0.0 |
2,347,184 | + | inaA | b2237 | 0.52 | +0.4 |
2,347,346 | + | inaA | b2237 | 0.77 | +0.3 |
2,347,361 | - | inaA | b2237 | 0.79 | +0.2 |
2,347,608 | - | +0.4 | |||
2,347,641 | - | -0.1 | |||
2,347,641 | - | +0.8 | |||
2,347,653 | + | +0.3 |
Or see this region's nucleotide sequence