Strain Fitness in Escherichia coli BW25113 around b1946

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
2,018,299	+	fliM	b1945	0.19	+0.8
2,018,411	+	fliM	b1945	0.30	+0.1
2,018,420	-	fliM	b1945	0.31	+0.4
2,018,466	+	fliM	b1945	0.35	-0.2
2,018,466	+	fliM	b1945	0.35	+0.3
2,018,608	-	fliM	b1945	0.49	+0.6
2,018,608	-	fliM	b1945	0.49	-0.4
2,018,610	-	fliM	b1945	0.50	-1.0
2,018,610	-	fliM	b1945	0.50	-0.1
2,018,652	-	fliM	b1945	0.54	+0.3
2,018,689	-	fliM	b1945	0.58	-0.1
2,018,689	-	fliM	b1945	0.58	-0.2
2,018,700	+	fliM	b1945	0.59	-0.4
2,018,870	+	fliM	b1945	0.76	+0.3
2,018,875	+	fliM	b1945	0.76	+0.2
2,018,890	-	fliM	b1945	0.78	+0.3
2,019,025	+				-0.0
2,019,106	+				+0.4
2,019,397	+	fliN	b1946	0.69	+0.1
2,019,437	+	fliN	b1946	0.79	+1.2
2,019,538	+				+0.1
2,019,538	+				-0.3
2,019,995	+	fliP	b1948	0.14	+0.1
2,020,000	+	fliP	b1948	0.14	-0.2
2,020,231	-	fliP	b1948	0.46	-0.1
2,020,359	-	fliP	b1948	0.63	+0.1
2,020,359	-	fliP	b1948	0.63	-0.6
2,020,375	+	fliP	b1948	0.65	+0.3
2,020,382	-	fliP	b1948	0.66	+0.1