Strain Fitness in Escherichia coli BW25113 around b1926

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
2,002,829	-	fliD	b1924	0.66	-0.3
2,002,892	-	fliD	b1924	0.71	-0.4
2,002,894	-	fliD	b1924	0.71	+0.1
2,002,894	-	fliD	b1924	0.71	+0.7
2,002,913	-	fliD	b1924	0.72	+1.0
2,003,080	-	fliD	b1924	0.84	-0.5
2,003,414	+	fliS	b1925	0.21	-0.0
2,003,451	-	fliS	b1925	0.30	-0.3
2,003,451	-	fliS	b1925	0.30	+0.8
2,003,451	-	fliS	b1925	0.30	+0.0
2,003,462	+	fliS	b1925	0.33	-0.3
2,003,544	+	fliS	b1925	0.53	+0.8
2,003,544	+	fliS	b1925	0.53	+0.4
2,003,699	+				+0.1
2,003,734	+				+0.3
2,003,735	-				-0.5
2,003,738	-				+0.0
2,003,923	-	fliT	b1926	0.51	+0.4
2,003,933	-	fliT	b1926	0.54	+1.0
2,004,035	+	fliT	b1926	0.81	+0.3
2,004,073	+				-0.4
2,004,135	+				+0.7
2,004,148	+				+0.4
2,004,241	+				+0.0
2,004,241	+				+0.0
2,004,249	-				+0.1
2,004,249	-				+0.3
2,004,249	-				-0.3
2,004,299	+				-0.4
2,004,446	+	amyA	b1927	0.18	-0.8
2,004,461	-	amyA	b1927	0.19	-0.1
2,004,533	+	amyA	b1927	0.24	+0.4
2,004,543	-	amyA	b1927	0.24	-0.0
2,004,614	-	amyA	b1927	0.29	-0.7
2,004,614	-	amyA	b1927	0.29	-0.9
2,004,739	-	amyA	b1927	0.38	-1.0
2,004,809	+	amyA	b1927	0.42	-0.5
2,004,861	-	amyA	b1927	0.46	+0.4
2,004,942	-	amyA	b1927	0.51	-0.6
2,005,017	-	amyA	b1927	0.56	-2.8