Strain Fitness in Escherichia coli BW25113 around b1366

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,422,846	+	trkG	b1363	0.71	+2.3
1,422,986	+	trkG	b1363	0.81	-0.5
1,423,139	+				+0.5
1,423,141	+				+0.7
1,423,185	+				-1.3
1,423,263	+				+2.3
1,423,330	-				+2.3
1,423,353	+				+1.3
1,423,358	-				+2.3
1,423,441	+	ynaK	b1365	0.15	+1.3
1,423,470	-	ynaK	b1365	0.26	-0.5
1,423,470	-	ynaK	b1365	0.26	+1.2
1,423,472	+	ynaK	b1365	0.27	+1.5
1,423,472	+	ynaK	b1365	0.27	-1.0
1,423,477	+	ynaK	b1365	0.29	-0.5
1,423,477	+	ynaK	b1365	0.29	+1.0
1,423,477	+	ynaK	b1365	0.29	+0.3
1,423,477	+	ynaK	b1365	0.29	+0.6
1,423,477	+	ynaK	b1365	0.29	-0.0
1,423,477	+	ynaK	b1365	0.29	-0.0
1,423,480	-	ynaK	b1365	0.30	-0.6
1,423,480	-	ynaK	b1365	0.30	-1.5
1,423,480	-	ynaK	b1365	0.30	+1.1
1,423,480	-	ynaK	b1365	0.30	+0.2
1,423,480	-	ynaK	b1365	0.30	+0.4
1,423,480	-	ynaK	b1365	0.30	-0.2
1,423,482	-	ynaK	b1365	0.31	-0.0
1,423,485	-	ynaK	b1365	0.32	+0.6
1,423,485	-	ynaK	b1365	0.32	+0.5
1,423,485	-	ynaK	b1365	0.32	+0.3
1,423,485	-	ynaK	b1365	0.32	+0.8
1,423,485	-	ynaK	b1365	0.32	+0.6
1,423,485	-	ynaK	b1365	0.32	-0.3
1,423,485	-	ynaK	b1365	0.32	-0.0
1,423,485	-	ynaK	b1365	0.32	-0.2
1,423,485	-	ynaK	b1365	0.32	+0.5
1,423,485	-	ynaK	b1365	0.32	-0.0
1,423,485	-	ynaK	b1365	0.32	-1.0
1,423,485	-	ynaK	b1365	0.32	+0.0
1,423,485	-	ynaK	b1365	0.32	+0.2
1,423,485	-	ynaK	b1365	0.32	+0.2
1,423,485	-	ynaK	b1365	0.32	-0.0
1,423,485	-	ynaK	b1365	0.32	+1.1
1,423,490	-	ynaK	b1365	0.34	-0.2
1,423,507	+	ynaK	b1365	0.40	+0.3
1,423,507	-	ynaK	b1365	0.40	-0.5
1,423,539	-	ynaK	b1365	0.52	+0.1
1,423,577	-	ynaK	b1365	0.67	+0.9
1,423,584	-	ynaK	b1365	0.69	-0.8
1,423,632	-	ynaK	b1365	0.88	+0.5
1,423,632	-	ynaK	b1365	0.88	+0.6
1,423,661	+				+0.2
1,423,664	-				+1.3
1,423,902	+	ydaY	b1366	0.55	+1.3
1,423,902	+	ydaY	b1366	0.55	+1.0
1,423,902	+	ydaY	b1366	0.55	+0.2
1,423,937	+	ydaY	b1366	0.62	-0.3
1,423,957	+	ydaY	b1366	0.67	-0.7
1,423,962	+	ydaY	b1366	0.68	-0.3
1,423,962	+	ydaY	b1366	0.68	+0.2
1,423,962	+	ydaY	b1366	0.68	+0.9
1,424,115	+				+0.1
1,424,126	+				+0.1
1,424,126	+				+2.3
1,424,159	+				-0.4
1,424,197	+				+0.4
1,424,234	+				+0.8
1,424,262	+				-0.0
1,424,288	+				-0.7
1,424,288	+				-0.4
1,424,318	+				-0.0
1,424,318	+				+0.2
1,424,319	+				-1.3
1,424,329	+				-1.0
1,424,329	+				-0.6
1,424,339	+				+0.3
1,424,341	+				-0.2
1,424,506	-				+0.5
1,424,506	-				+1.3
1,424,514	-				+2.3
1,424,628	+	ynaA	b1368	0.16	+0.3
1,424,677	+	ynaA	b1368	0.21	+2.3
1,424,862	-	ynaA	b1368	0.41	+0.6
1,424,862	-	ynaA	b1368	0.41	-1.9
1,424,869	-	ynaA	b1368	0.42	+0.5
1,425,045	+	ynaA	b1368	0.61	+0.7
1,425,045	+	ynaA	b1368	0.61	+2.3
1,425,060	+	ynaA	b1368	0.62	+0.3