Strain Fitness in Escherichia coli BW25113 around b1271

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,325,635	-	rluB	b1269	0.87	+0.4
1,325,636	-	rluB	b1269	0.87	-0.4
1,325,636	-	rluB	b1269	0.87	-0.8
1,325,814	+				+0.6
1,325,882	-	btuR	b1270	0.15	-0.1
1,325,954	-	btuR	b1270	0.28	+0.0
1,326,099	-	btuR	b1270	0.52	+0.4
1,326,099	-	btuR	b1270	0.52	+0.9
1,326,296	-	btuR	b1270	0.85	-0.0
1,326,420	+				+0.0
1,326,420	+				-0.4
1,326,546	+	yciK	b1271	0.22	+0.2
1,326,719	+	yciK	b1271	0.45	+1.1
1,326,742	-	yciK	b1271	0.48	+0.1
1,326,851	-	yciK	b1271	0.62	-0.1
1,327,275	+				-1.8
1,327,297	+				+0.3
1,327,500	+	sohB	b1272	0.14	-0.3
1,327,505	+	sohB	b1272	0.14	+0.5
1,327,505	+	sohB	b1272	0.14	+0.2
1,327,511	-	sohB	b1272	0.15	+0.8
1,327,511	-	sohB	b1272	0.15	-0.3
1,327,565	+	sohB	b1272	0.20	+0.3
1,327,565	+	sohB	b1272	0.20	-1.1
1,327,752	-	sohB	b1272	0.38	-1.0
1,327,752	-	sohB	b1272	0.38	-2.1
1,327,797	+	sohB	b1272	0.42	-0.3
1,327,797	+	sohB	b1272	0.42	-1.6
1,327,902	-	sohB	b1272	0.52	+0.2
1,328,003	+	sohB	b1272	0.62	-0.5
1,328,032	-	sohB	b1272	0.64	+0.2
1,328,039	+	sohB	b1272	0.65	+0.5
1,328,039	+	sohB	b1272	0.65	-0.5