Strain Fitness in Escherichia coli BW25113 around b1250

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,306,053	-	cls	b1249	0.58	-0.0
1,306,071	-	cls	b1249	0.59	-0.6
1,306,203	+	cls	b1249	0.68	-1.6
1,306,258	-	cls	b1249	0.72	-0.0
1,306,303	+	cls	b1249	0.75	-0.6
1,306,303	+	cls	b1249	0.75	+0.1
1,306,401	+	cls	b1249	0.82	+0.5
1,306,401	+	cls	b1249	0.82	+0.7
1,306,625	-				+0.7
1,306,762	-				-2.5
1,306,782	-				+2.4
1,306,955	+	yciY	b4595	0.82	-0.1
1,306,955	+	yciY	b4595	0.82	+0.5
1,306,998	+				+1.1
1,307,001	+				-3.3
1,307,013	+				-1.2
1,307,235	-	kch	b1250	0.16	+0.7
1,307,325	-	kch	b1250	0.23	+0.2
1,307,331	+	kch	b1250	0.23	+0.9
1,307,342	+	kch	b1250	0.24	+0.8
1,307,350	-	kch	b1250	0.25	+1.4
1,307,350	-	kch	b1250	0.25	+0.8
1,307,350	-	kch	b1250	0.25	-2.0
1,307,353	+	kch	b1250	0.25	+0.5
1,307,353	+	kch	b1250	0.25	+1.3
1,307,353	+	kch	b1250	0.25	+0.9
1,307,387	-	kch	b1250	0.28	+0.5
1,307,431	+	kch	b1250	0.31	+0.4
1,307,441	+	kch	b1250	0.32	+0.8
1,307,444	+	kch	b1250	0.32	+1.0
1,307,510	+	kch	b1250	0.37	+1.1
1,307,524	+	kch	b1250	0.39	-0.1
1,307,524	+	kch	b1250	0.39	-0.8
1,307,613	+	kch	b1250	0.46	-0.4
1,307,613	+	kch	b1250	0.46	+0.5
1,307,620	-	kch	b1250	0.46	+0.3
1,307,820	-	kch	b1250	0.62	+0.1
1,307,827	-	kch	b1250	0.63	-0.1
1,307,895	-	kch	b1250	0.68	+2.0
1,307,994	-	kch	b1250	0.76	-0.5
1,307,994	-	kch	b1250	0.76	+0.2
1,308,003	+	kch	b1250	0.77	+2.4
1,308,045	+	kch	b1250	0.80	+1.1
1,308,061	-	kch	b1250	0.81	-0.7
1,308,061	-	kch	b1250	0.81	+1.2
1,308,068	+	kch	b1250	0.82	-0.2
1,308,103	+	kch	b1250	0.85	+0.4
1,308,110	+	kch	b1250	0.85	+1.6
1,308,256	-				-0.3
1,308,285	+				-0.1
1,308,298	-				-0.6
1,308,300	-				-0.5
1,308,380	+				-0.3
1,308,656	-	yciI	b1251	0.21	-0.7
1,308,663	-	yciI	b1251	0.24	+0.1
1,308,679	-	yciI	b1251	0.29	+0.7
1,308,679	-	yciI	b1251	0.29	+0.7
1,308,732	+	yciI	b1251	0.47	+0.6
1,308,741	-	yciI	b1251	0.50	+0.6
1,308,744	+	yciI	b1251	0.51	-0.6
1,308,744	+	yciI	b1251	0.51	+0.1
1,309,193	+	tonB	b1252	0.11	+0.9
1,309,201	-	tonB	b1252	0.12	+2.0
1,309,201	-	tonB	b1252	0.12	-0.5
1,309,201	-	tonB	b1252	0.12	+0.2