Strain Fitness in Escherichia coli BW25113 around b0296

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
310,829	+				+1.7
310,880	-				+1.1
310,891	-				+1.1
310,891	-				+3.7
310,892	-				+1.7
310,892	-				+1.1
310,894	-				+1.7
310,904	-				-0.1
311,087	-				+1.3
311,091	-				-0.0
311,100	+				-1.3
311,100	+				-0.9
311,114	-				+0.8
311,138	-				-0.3
311,172	-				-0.2
311,172	-				-1.9
311,194	-				-2.6
311,222	-				+0.6
311,222	-				-0.2
311,256	+				+0.0
311,260	+				-0.7
311,260	+				+0.3
311,352	+				+0.1
311,360	+	ykgL	b0295	0.11	-0.4
311,360	+	ykgL	b0295	0.11	-0.5
311,364	-	ykgL	b0295	0.12	+0.5
311,370	+	ykgL	b0295	0.15	+0.4
311,380	+	ykgL	b0295	0.19	+0.1
311,385	+	ykgL	b0295	0.21	+0.5
311,385	+	ykgL	b0295	0.21	+0.6
311,396	+	ykgL	b0295	0.26	-1.0
311,396	+	ykgL	b0295	0.26	+2.3
311,402	+	ykgL	b0295	0.29	+0.5
311,402	+	ykgL	b0295	0.29	-0.3
311,418	-	ykgL	b0295	0.36	-0.5
311,470	+	ykgL	b0295	0.59	+0.4
311,470	+	ykgL	b0295	0.59	-0.2
311,525	+	ykgL	b0295	0.83	+2.7
311,626	+	ykgO	b4506	0.20	+1.1
311,626	+	ykgO	b4506	0.20	+2.7
311,634	-	ykgO	b4506	0.26	+0.3
311,634	-	ykgO	b4506	0.26	-0.1
311,634	-	ykgO	b4506	0.26	-1.5
311,722	+	ykgO	b4506	0.88	-0.1
311,722	+	ykgO	b4506	0.88	+2.7
311,829	+	ykgM	b0296	0.34	+0.6
311,829	-	ykgM	b0296	0.34	+0.4
311,944	-	ykgM	b0296	0.78	-0.1
311,977	+				-0.8
311,985	-				+0.0
312,124	+				-0.1
312,124	+				-0.6
312,125	+				+0.3
312,144	+				-0.2
312,146	+				+1.0
312,146	+				+0.9
312,215	+				-0.2
312,216	+				-0.1
312,258	+				-1.2
312,258	+				-0.2
312,260	+				-0.6
312,269	+				+0.2
312,488	-				-0.4
312,488	-				-0.7
312,488	-				+0.4
312,488	-				+0.6
312,490	-				-0.3
312,505	-				+0.1
312,520	-				-0.1
312,522	-				-0.0
312,570	+				+0.2
312,586	+				-1.8
312,596	+				+0.0
312,605	+				-0.7
312,615	-				-0.3
312,619	+				+0.7
312,642	-				-1.9
312,648	+				+0.6
312,648	+				-0.1
312,650	+				-0.7
312,658	-				-0.1
312,660	+				+1.1
312,660	+				-2.1
312,664	+				+0.9
312,666	+				+1.1
312,672	-				+0.8
312,674	-				+2.0
312,677	+				+0.7
312,679	-				+0.7
312,679	-				+0.1
312,690	-				+0.4
312,690	-				+2.1
312,693	-				+0.7
312,695	+				+0.7
312,712	-				+1.1
312,721	+				-0.2
312,721	+				-0.7
312,721	+				+1.1
312,729	+				+2.7
312,731	-				+1.7
312,743	+				+0.7
312,766	+				+1.1
312,784	+				-0.3
312,785	-				+2.7
312,800	+				-0.3
312,800	+				-1.0
312,800	+				+1.1
312,802	+				-0.2
312,805	+				+0.4
312,810	+				+1.1
312,816	+				+1.7
312,818	+				+1.7
312,822	+				+2.7
312,822	+				+1.7
312,829	+				+1.1
312,831	+				+2.7
312,831	+				+2.7
312,837	-				+0.1
312,837	-				-0.7
312,839	-				+1.1
312,841	-				+0.7
312,841	-				+1.4
312,841	-				-0.9
312,854	-				-0.4
312,854	-				+1.3
312,968	-	ykgP	b4630	0.31	-0.3
312,973	-	ykgP	b4630	0.37	+0.1
312,973	-	ykgP	b4630	0.37	+0.8