Strain Fitness in Escherichia coli BW25113 around b3816

Experiment: LB Anaerobic Allura Red AC 250 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic Allura Red AC 250 uM
3,998,529	-	yigE	b4482	0.28	-0.6
3,998,572	+	yigE	b4482	0.34	+0.0
3,998,654	-	yigE	b4482	0.44	-0.1
3,998,658	-	yigE	b4482	0.45	-2.0
3,998,717	+	yigE	b4482	0.53	+0.2
3,998,776	-	yigE	b4482	0.60	+0.3
3,998,824	+	yigE	b4482	0.67	-0.1
3,998,866	-	yigE	b4482	0.72	-0.2
3,998,912	-	yigE	b4482	0.78	+0.7
3,998,912	-	yigE	b4482	0.78	-0.1
3,998,917	+	yigE	b4482	0.79	-0.4
3,998,939	+	yigE	b4482	0.82	-0.4
3,998,941	+	yigE	b4482	0.82	+0.2
3,998,942	-	yigE	b4482	0.82	+0.2
3,998,947	-	yigE	b4482	0.83	-0.4
3,998,947	-	yigE	b4482	0.83	-1.0
3,999,078	+				-0.3
3,999,084	-				-0.6
3,999,084	-				-0.7
3,999,127	-				-0.5
3,999,127	-				-1.1
3,999,127	-				+0.3
3,999,162	+				+0.0
3,999,167	+				-0.5
3,999,209	-				+0.9
3,999,222	+				+1.5
3,999,222	+				+0.0
3,999,230	-				+0.4
3,999,230	-				+0.7
3,999,230	-				+0.3
3,999,238	+				+0.5
3,999,254	+				+0.5
3,999,257	+				+0.1
3,999,257	+				+0.0
3,999,279	+				+1.0
3,999,284	+				+0.5
3,999,284	+				-0.1
3,999,299	-				+0.7
3,999,300	-				+1.6
3,999,333	-				+0.8
3,999,333	-				+0.8
3,999,361	+				-0.1
3,999,399	-				+0.9
3,999,407	+				+0.3
3,999,407	+				+0.2
3,999,407	+				-0.6
3,999,548	-	corA	b3816	0.10	+0.4
3,999,582	+				+1.2
3,999,582	+	corA	b3816	0.14	+1.3
3,999,584	+	corA	b3816	0.14	+1.1
3,999,588	+	corA	b3816	0.15	+0.5
3,999,664	+	corA	b3816	0.23	+0.2
3,999,664	+	corA	b3816	0.23	+0.1
3,999,664	+	corA	b3816	0.23	+0.6
3,999,665	+	corA	b3816	0.23	+0.9
3,999,665	+	corA	b3816	0.23	-0.8
3,999,718	-	corA	b3816	0.28	+1.2
3,999,718	-	corA	b3816	0.28	+1.7
3,999,723	-	corA	b3816	0.29	-0.4
3,999,743	-	corA	b3816	0.31	+1.7
3,999,751	+	corA	b3816	0.32	+0.4
3,999,758	-	corA	b3816	0.32	+1.0
3,999,758	-	corA	b3816	0.32	+0.4
3,999,765	+	corA	b3816	0.33	+0.0
3,999,768	-	corA	b3816	0.34	-0.2
3,999,768	-	corA	b3816	0.34	-0.5
3,999,797	-	corA	b3816	0.37	+0.9
3,999,797	-	corA	b3816	0.37	+1.6
3,999,804	+	corA	b3816	0.37	+1.8
3,999,826	+	corA	b3816	0.40	+0.6
3,999,877	+	corA	b3816	0.45	+0.5
3,999,877	-	corA	b3816	0.45	+0.9
3,999,898	+	corA	b3816	0.47	+0.8
3,999,898	+	corA	b3816	0.47	+0.4
3,999,898	+	corA	b3816	0.47	+1.3
3,999,899	+	corA	b3816	0.47	+0.1
3,999,958	+	corA	b3816	0.54	+0.7
3,999,970	+	corA	b3816	0.55	+0.1
3,999,970	+	corA	b3816	0.55	+0.6
3,999,978	-	corA	b3816	0.56	+0.7
3,999,978	-	corA	b3816	0.56	-0.1
4,000,008	+	corA	b3816	0.59	+0.9
4,000,019	+	corA	b3816	0.60	-0.0
4,000,040	+	corA	b3816	0.62	-1.0
4,000,040	+	corA	b3816	0.62	+0.8
4,000,077	-	corA	b3816	0.66	-0.1
4,000,077	-	corA	b3816	0.66	-0.2
4,000,103	+	corA	b3816	0.69	+0.9
4,000,147	+	corA	b3816	0.73	+0.7
4,000,147	+	corA	b3816	0.73	+0.7
4,000,154	+	corA	b3816	0.74	+0.8
4,000,202	-	corA	b3816	0.79	+1.0
4,000,214	+	corA	b3816	0.80	+0.9
4,000,214	+	corA	b3816	0.80	+0.6
4,000,232	-	corA	b3816	0.82	+3.5
4,000,238	+	corA	b3816	0.83	+1.7
4,000,273	-	corA	b3816	0.87	+0.5
4,000,275	-	corA	b3816	0.87	+1.1
4,000,291	-	corA	b3816	0.89	+1.0
4,000,301	+	corA	b3816	0.90	+0.1
4,000,340	+				+0.6
4,000,340	+				+1.1
4,000,340	+				+0.1
4,000,369	+				+1.3
4,000,410	+				+0.3
4,000,414	+				-1.1
4,000,415	+				+0.1
4,000,415	-				+0.7
4,000,423	-				+0.3
4,000,430	+				+0.4
4,000,430	+				-0.9
4,000,430	+				+0.1
4,000,437	+				-0.1
4,000,437	+				+0.4
4,000,440	+				+0.4
4,000,445	-				-0.2
4,000,445	-				-0.9
4,000,455	-				+0.2
4,000,459	-				-0.1
4,000,474	-				+0.2
4,000,485	+	yigF	b3817	0.11	-0.4
4,000,491	+	yigF	b3817	0.13	-0.7
4,000,492	-	yigF	b3817	0.13	+0.2
4,000,496	+	yigF	b3817	0.14	+0.1
4,000,506	+	yigF	b3817	0.17	-0.3
4,000,508	+	yigF	b3817	0.17	+0.7
4,000,508	+	yigF	b3817	0.17	-0.2
4,000,508	+	yigF	b3817	0.17	-0.2
4,000,508	+	yigF	b3817	0.17	-0.4
4,000,509	+	yigF	b3817	0.18	+0.4
4,000,509	+	yigF	b3817	0.18	+0.7
4,000,509	+	yigF	b3817	0.18	+0.5
4,000,509	+	yigF	b3817	0.18	-0.6
4,000,510	-	yigF	b3817	0.18	-0.3
4,000,510	-	yigF	b3817	0.18	+0.4
4,000,512	-	yigF	b3817	0.18	+0.0
4,000,512	-	yigF	b3817	0.18	-0.2
4,000,516	-	yigF	b3817	0.19	+0.1
4,000,516	-	yigF	b3817	0.19	-0.4
4,000,516	-	yigF	b3817	0.19	+0.5
4,000,516	-	yigF	b3817	0.19	+0.2
4,000,517	-	yigF	b3817	0.20	-0.1
4,000,517	-	yigF	b3817	0.20	-0.1
4,000,546	-	yigF	b3817	0.27	-1.5
4,000,561	+	yigF	b3817	0.31	-0.5
4,000,561	+	yigF	b3817	0.31	+0.4
4,000,563	+	yigF	b3817	0.32	-1.4
4,000,570	+	yigF	b3817	0.34	-0.0
4,000,570	+	yigF	b3817	0.34	+0.1
4,000,570	+	yigF	b3817	0.34	-0.2
4,000,606	+	yigF	b3817	0.43	+0.2
4,000,606	+	yigF	b3817	0.43	+0.7
4,000,635	-	yigF	b3817	0.51	+0.3
4,000,814	-				+1.7
4,000,867	-				-0.3
4,000,867	-				+0.7
4,000,927	-	yigG	b3818	0.24	+1.7
4,001,179	-				+0.1
4,001,185	-				-0.9
4,001,195	-				+0.3
4,001,205	-				+0.2
4,001,232	+				+1.7
4,001,238	-				+0.2
4,001,238	-				+0.0
4,001,238	-				+0.1
4,001,238	-				+0.4
4,001,238	-				-0.4
4,001,238	-				+0.7
4,001,240	-				-0.1
4,001,240	-				+0.1
4,001,242	+				+1.7
4,001,242	+				+0.1
4,001,242	+				+0.7
4,001,242	-				-1.3
4,001,244	+				+1.7
4,001,244	+				+1.7
4,001,250	-				+0.3
4,001,250	-				-0.3
4,001,250	-				-0.0
4,001,252	-				+2.5
4,001,253	+				+1.7
4,001,262	-				-0.1
4,001,262	-				+0.5
4,001,263	-				+0.7
4,001,263	-				+0.3
4,001,263	-				+1.7
4,001,268	+				+1.7
4,001,274	-				-0.6
4,001,276	-				+0.1
4,001,276	-				+0.0
4,001,276	-				+0.4
4,001,276	-				+0.4
4,001,276	-				+0.2
4,001,276	-				+0.1
4,001,277	-				+0.2
4,001,277	-				-0.2
4,001,279	-				-0.6
4,001,329	-				+0.4
4,001,329	-				-0.1
4,001,329	-				+0.2
4,001,329	-				+0.5
4,001,329	-				-1.1
4,001,329	-				-0.6
4,001,329	-				-0.4
4,001,329	-				-0.7
4,001,329	-				-1.0
4,001,329	-				+0.0
4,001,329	-				+0.5
4,001,329	-				+0.4
4,001,329	-				-0.1
4,001,329	-				+0.2
4,001,329	-				+0.4
4,001,329	-				-0.0
4,001,329	-				+0.1
4,001,329	-				+0.2
4,001,329	-				-0.1
4,001,329	-				-0.3
4,001,329	-				+0.2
4,001,329	-				+0.2
4,001,331	-				+0.5
4,001,331	-				-0.0
4,001,338	-				-0.3
4,001,338	-				-0.2
4,001,339	-				-0.3
4,001,339	-				+0.1
4,001,339	-				+0.3
4,001,341	-				+0.1
4,001,341	-				+0.3
4,001,347	+				+1.7
4,001,347	+				+1.7
4,001,372	-				-0.2
4,001,386	-				-0.8
4,001,386	-				-0.5
4,001,387	+				+1.7
4,001,395	+				+1.7
4,001,395	-				+0.4