Strain Fitness in Pseudomonas putida KT2440 around PP_5414

Experiment: TNT (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPP_5413 and PP_5414 are separated by 27 nucleotidesPP_5414 and PP_5415 are separated by 48 nucleotides PP_5413: PP_5413 - ATP synthase subunit beta, at 6,175,220 to 6,176,596 _5413 PP_5414: PP_5414 - ATP synthase gamma chain, at 6,176,624 to 6,177,484 _5414 PP_5415: PP_5415 - ATP synthase subunit alpha, at 6,177,533 to 6,179,077 _5415 Position (kb) 6176 6177 6178Strain fitness (log2 ratio) -1 0 1at 6177.494 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TNT (N)
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6,177,494 - +0.4

Or see this region's nucleotide sequence