Strain Fitness in Escherichia coli BW25113 around b1752

Experiment: vcDART vector transformation; liquid outgrowth assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vcDART vector transformation; liquid outgrowth assay
1,831,834	+	ydjX	b1750	0.58	+0.1
1,831,992	-	ydjX	b1750	0.80	+0.4
1,832,016	+	ydjX	b1750	0.83	-0.8
1,832,016	+	ydjX	b1750	0.83	-1.2
1,832,084	-				-2.3
1,832,113	-				+0.7
1,832,113	-				-1.5
1,832,187	+				-0.5
1,832,403	+	ydjY	b1751	0.39	+1.7
1,832,456	+	ydjY	b1751	0.47	+0.3
1,832,456	+	ydjY	b1751	0.47	+1.2
1,832,456	+	ydjY	b1751	0.47	-1.4
1,832,456	+	ydjY	b1751	0.47	+0.0
1,832,475	-	ydjY	b1751	0.49	-0.4
1,832,475	-	ydjY	b1751	0.49	-0.2
1,832,682	+	ydjY	b1751	0.80	-0.5
1,832,707	-	ydjY	b1751	0.84	-0.1
1,833,245	+	ydjZ	b1752	0.58	-1.6
1,833,394	-	ydjZ	b1752	0.79	-1.7
1,833,430	-	ydjZ	b1752	0.84	-1.2
1,833,789	+	ynjA	b1753	0.46	-0.7
1,833,789	+	ynjA	b1753	0.46	+0.2
1,834,210	+				+0.3
1,834,332	-	b1754	b1754	0.20	+0.1
1,834,427	+	b1754	b1754	0.28	-2.4