Strain Fitness in Escherichia coli BW25113 around b4443

Experiment: BHIS no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
2,939,778	-	gcvA	b2808	0.12	-3.0
2,939,778	-	gcvA	b2808	0.12	-2.9
2,939,804	+	gcvA	b2808	0.14	-1.1
2,939,912	-	gcvA	b2808	0.26	-2.4
2,939,914	-	gcvA	b2808	0.26	+0.2
2,939,982	-	gcvA	b2808	0.34	-1.4
2,939,982	-	gcvA	b2808	0.34	-1.8
2,939,985	-	gcvA	b2808	0.34	-2.3
2,939,987	-	gcvA	b2808	0.34	-2.0
2,940,001	+	gcvA	b2808	0.36	-1.4
2,940,068	+	gcvA	b2808	0.43	-2.6
2,940,171	-	gcvA	b2808	0.54	-1.1
2,940,171	-	gcvA	b2808	0.54	-0.4
2,940,289	+	gcvA	b2808	0.67	-4.2
2,940,331	+	gcvA	b2808	0.72	-2.1
2,940,399	-	gcvA	b2808	0.79	-2.3
2,940,417	-	gcvA	b2808	0.81	-2.1
2,940,477	-	gcvA	b2808	0.88	-1.8
2,940,522	+				-2.6
2,940,587	-				+0.5
2,940,719	+				-3.4
2,940,838	-	gcvB	b4443	0.58	+1.2
2,940,909	-				+0.2
2,941,082	-	b2809	b2809	0.62	-0.8
2,941,082	-	b2809	b2809	0.62	-0.8
2,941,096	-	b2809	b2809	0.68	-1.3
2,941,096	-	b2809	b2809	0.68	-1.5
2,941,157	+				+0.2
2,941,157	+				-0.3
2,941,203	+				+0.2
2,941,203	+				-0.5
2,941,239	+				-0.5
2,941,254	-				-1.1
2,941,254	-				-1.3
2,941,422	+				+0.2
2,941,422	+				-0.7
2,941,425	+				+0.3
2,941,430	-				+0.1
2,941,430	-				-0.4
2,941,619	-	csdA	b2810	0.22	-0.7
2,941,619	-	csdA	b2810	0.22	-0.0
2,941,657	+	csdA	b2810	0.25	-0.9
2,941,663	-	csdA	b2810	0.25	+0.1
2,941,736	+	csdA	b2810	0.31	+0.6
2,941,743	-	csdA	b2810	0.32	+0.5
2,941,790	-	csdA	b2810	0.36	-0.1
2,941,790	-	csdA	b2810	0.36	-0.1
2,941,898	-	csdA	b2810	0.45	+0.2