Strain Fitness in Escherichia coli BW25113 around b3289

Experiment: BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
3,432,238	+				+0.6
3,433,170	+				-0.0
3,433,177	+				-0.5
3,433,178	+				+0.2
3,433,186	-				-1.0
3,433,186	-				+0.6
3,433,193	+				-0.3
3,433,193	+				+1.1
3,433,218	+				-0.2
3,433,260	-				-0.3
3,433,293	+				-1.8
3,433,374	+	rsmB	b3289	0.11	-1.2
3,433,374	+	rsmB	b3289	0.11	-0.8
3,433,374	+	rsmB	b3289	0.11	-0.5
3,433,379	-	rsmB	b3289	0.12	+0.8
3,433,384	-	rsmB	b3289	0.12	-0.4
3,433,392	-	rsmB	b3289	0.13	+0.3
3,433,393	+	rsmB	b3289	0.13	-0.6
3,433,397	+	rsmB	b3289	0.13	-0.6
3,433,397	+	rsmB	b3289	0.13	+0.1
3,433,397	+	rsmB	b3289	0.13	-0.3
3,433,397	+	rsmB	b3289	0.13	-1.3
3,433,397	+	rsmB	b3289	0.13	-0.9
3,433,397	+	rsmB	b3289	0.13	-0.5
3,433,421	-	rsmB	b3289	0.15	-0.6
3,433,421	-	rsmB	b3289	0.15	-1.9
3,433,440	-	rsmB	b3289	0.16	-0.5
3,433,447	+	rsmB	b3289	0.17	-0.3
3,433,464	+	rsmB	b3289	0.18	-1.1
3,433,466	-	rsmB	b3289	0.18	-1.0
3,433,472	-	rsmB	b3289	0.19	-0.5
3,433,497	+	rsmB	b3289	0.21	+1.0
3,433,504	+	rsmB	b3289	0.21	-1.4
3,433,511	-	rsmB	b3289	0.22	-1.3
3,433,518	-	rsmB	b3289	0.22	-0.9
3,433,523	-	rsmB	b3289	0.23	+0.0
3,433,523	-	rsmB	b3289	0.23	-0.6
3,433,525	+	rsmB	b3289	0.23	+0.0
3,433,525	+	rsmB	b3289	0.23	-1.4
3,433,567	+	rsmB	b3289	0.26	-0.9
3,433,589	+	rsmB	b3289	0.28	-0.2
3,433,629	-	rsmB	b3289	0.31	-1.3
3,433,665	+	rsmB	b3289	0.34	-0.3
3,433,665	+	rsmB	b3289	0.34	+1.3
3,433,665	+	rsmB	b3289	0.34	-0.5
3,433,671	-	rsmB	b3289	0.34	-1.0
3,433,671	-	rsmB	b3289	0.34	-0.3
3,433,673	-	rsmB	b3289	0.34	-0.4
3,433,698	+	rsmB	b3289	0.36	+0.1
3,433,706	-	rsmB	b3289	0.37	-1.3
3,433,706	-	rsmB	b3289	0.37	-0.3
3,433,706	-	rsmB	b3289	0.37	-0.6
3,433,758	+	rsmB	b3289	0.41	-0.5
3,433,837	+	rsmB	b3289	0.47	-0.5
3,433,843	+	rsmB	b3289	0.48	+0.4
3,433,843	+	rsmB	b3289	0.48	-0.5
3,433,845	-	rsmB	b3289	0.48	-0.9
3,433,845	-	rsmB	b3289	0.48	+0.0
3,433,851	+	rsmB	b3289	0.48	+0.2
3,433,859	-	rsmB	b3289	0.49	-0.0
3,433,864	-	rsmB	b3289	0.49	+0.0
3,433,864	-	rsmB	b3289	0.49	-0.2
3,433,864	-	rsmB	b3289	0.49	-1.6
3,433,877	+	rsmB	b3289	0.50	-0.0
3,433,936	+	rsmB	b3289	0.55	-0.8
3,433,939	-	rsmB	b3289	0.55	-0.7
3,433,944	-	rsmB	b3289	0.55	-0.7
3,433,953	-	rsmB	b3289	0.56	-0.6
3,434,019	+	rsmB	b3289	0.61	-0.7
3,434,027	-	rsmB	b3289	0.62	-0.3
3,434,036	+	rsmB	b3289	0.63	-2.0
3,434,071	-	rsmB	b3289	0.65	-2.1
3,434,071	-	rsmB	b3289	0.65	-2.1
3,434,112	-	rsmB	b3289	0.68	+0.1
3,434,134	-				-1.0
3,434,141	-	rsmB	b3289	0.71	-0.8
3,434,141	-	rsmB	b3289	0.71	-0.6
3,434,147	-	rsmB	b3289	0.71	-1.6
3,434,147	-	rsmB	b3289	0.71	-0.9
3,434,150	+	rsmB	b3289	0.71	-0.2
3,434,158	-	rsmB	b3289	0.72	-0.7
3,434,333	+	rsmB	b3289	0.86	+0.4
3,434,339	-	rsmB	b3289	0.86	-0.4
3,434,350	-	rsmB	b3289	0.87	-0.7
3,434,350	-	rsmB	b3289	0.87	-0.7
3,434,352	+	rsmB	b3289	0.87	+0.5
3,434,357	+	rsmB	b3289	0.87	-0.6
3,434,366	+	rsmB	b3289	0.88	-1.0
3,434,370	+	rsmB	b3289	0.88	-0.4
3,434,402	+				-0.6
3,434,430	+				-0.8
3,434,430	+				+0.4
3,434,432	+				-0.5
3,434,432	+				-0.2
3,434,433	+				-0.6
3,434,433	+				-0.9
3,434,471	+				-1.0
3,434,477	-				-0.8
3,434,477	-				+0.2
3,434,504	-				+0.6
3,434,504	-				-1.3
3,434,673	+				+0.0
3,434,812	-	trkA	b3290	0.20	+1.0
3,434,850	+	trkA	b3290	0.23	+1.0
3,434,913	-	trkA	b3290	0.27	+1.0
3,434,918	-	trkA	b3290	0.27	+1.0
3,434,955	-	trkA	b3290	0.30	+0.0
3,434,955	-	trkA	b3290	0.30	+1.0
3,435,049	+	trkA	b3290	0.37	+1.0
3,435,185	+	trkA	b3290	0.47	+0.0
3,435,275	+	trkA	b3290	0.53	-1.0
3,435,314	-	trkA	b3290	0.56	+0.0
3,435,416	+	trkA	b3290	0.64	-1.0
3,435,474	-	trkA	b3290	0.68	+1.0
3,435,476	-	trkA	b3290	0.68	+1.0