Strain Fitness in Escherichia coli BW25113 around b2905

Experiment: BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
3,046,636	+	gcvP	b2903	0.85	-0.3
3,046,636	+	gcvP	b2903	0.85	-0.1
3,046,653	-	gcvP	b2903	0.86	-0.4
3,046,659	-	gcvP	b2903	0.86	+0.9
3,046,685	-	gcvP	b2903	0.87	-0.1
3,046,693	+	gcvP	b2903	0.87	+0.1
3,046,693	+	gcvP	b2903	0.87	+0.0
3,046,693	-	gcvP	b2903	0.87	-0.5
3,046,696	-	gcvP	b2903	0.87	-0.3
3,046,706	-	gcvP	b2903	0.88	-0.4
3,046,724	+	gcvP	b2903	0.88	-0.4
3,046,724	+	gcvP	b2903	0.88	-0.3
3,046,733	+	gcvP	b2903	0.88	-0.6
3,046,803	-				+0.2
3,046,848	+				-0.6
3,046,854	-				+0.2
3,046,877	-				-0.4
3,047,124	-				+0.1
3,047,124	-				+0.9
3,047,214	-				-0.6
3,047,214	-				-0.6
3,047,321	+	gcvH	b2904	0.36	-0.3
3,047,321	+	gcvH	b2904	0.36	-0.5
3,047,468	+	gcvH	b2904	0.73	-1.1
3,047,542	+				-1.2
3,047,542	+				-2.0
3,047,684	+				-1.5
3,047,765	+	gcvT	b2905	0.16	-1.0
3,047,796	+	gcvT	b2905	0.18	+0.2
3,047,865	-	gcvT	b2905	0.25	-0.5
3,047,865	-	gcvT	b2905	0.25	-1.0
3,047,871	-	gcvT	b2905	0.25	-0.7
3,047,871	-	gcvT	b2905	0.25	-0.8
3,048,013	+	gcvT	b2905	0.38	-1.3
3,048,057	-	gcvT	b2905	0.42	-1.1
3,048,128	-	gcvT	b2905	0.49	+0.4
3,048,181	-	gcvT	b2905	0.54	-1.6
3,048,181	-	gcvT	b2905	0.54	-0.2
3,048,196	-	gcvT	b2905	0.55	-0.1
3,048,196	-	gcvT	b2905	0.55	+0.2
3,048,231	-	gcvT	b2905	0.58	+0.2
3,048,231	-	gcvT	b2905	0.58	-0.6
3,048,264	-	gcvT	b2905	0.61	-0.7
3,048,306	+	gcvT	b2905	0.65	-0.6
3,048,324	-	gcvT	b2905	0.67	-0.5
3,048,339	+	gcvT	b2905	0.68	-1.3
3,048,339	+	gcvT	b2905	0.68	-1.9
3,048,399	+	gcvT	b2905	0.73	-0.4
3,048,569	+	gcvT	b2905	0.89	-1.2
3,048,569	+	gcvT	b2905	0.89	-0.6
3,048,608	-				-0.0
3,048,624	-				-0.1
3,048,683	+				-1.0
3,048,683	+				-1.0
3,048,756	+				-2.4
3,048,756	+				-1.3
3,048,859	-				+0.0
3,048,859	-				-0.4
3,048,928	-				-1.0
3,049,195	-				-1.3
3,049,205	-				-0.8
3,049,205	-				-0.6
3,049,208	-				-0.3
3,049,208	-				+0.3
3,049,213	-				-1.0
3,049,310	-	visC	b2906	0.14	-1.7
3,049,310	-	visC	b2906	0.14	-0.4
3,049,315	-	visC	b2906	0.15	-1.0
3,049,365	+	visC	b2906	0.19	-1.4
3,049,406	+	visC	b2906	0.22	-1.1
3,049,458	+	visC	b2906	0.27	-1.2
3,049,474	-	visC	b2906	0.28	-0.0
3,049,536	+	visC	b2906	0.33	-1.2
3,049,544	-	visC	b2906	0.34	-1.0
3,049,544	-	visC	b2906	0.34	-0.7
3,049,546	-	visC	b2906	0.34	-2.5
3,049,546	-	visC	b2906	0.34	-1.0
3,049,546	-	visC	b2906	0.34	+0.3
3,049,549	+	visC	b2906	0.34	-0.2
3,049,563	-	visC	b2906	0.35	-0.7
3,049,632	+	visC	b2906	0.41	-1.9