Strain Fitness in Escherichia coli BW25113 around b2620
Experiment: BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr |
---|---|---|---|---|---|
remove | |||||
2,751,941 | + | -0.1 | |||
2,752,081 | + | b2618 | b2618 | 0.18 | -0.5 |
2,752,081 | + | b2618 | b2618 | 0.18 | +0.4 |
2,752,092 | + | b2618 | b2618 | 0.21 | -0.1 |
2,752,118 | - | b2618 | b2618 | 0.30 | -0.3 |
2,752,150 | + | b2618 | b2618 | 0.41 | +0.1 |
2,752,822 | + | +0.1 | |||
2,752,851 | - | -0.6 | |||
2,753,096 | + | smpB | b2620 | 0.37 | -0.6 |
2,753,223 | - | smpB | b2620 | 0.63 | -1.0 |
2,753,223 | - | smpB | b2620 | 0.63 | -0.8 |
2,753,403 | + | -0.0 | |||
2,753,530 | + | -0.1 | |||
2,754,108 | + | -0.3 | |||
2,754,230 | + | -0.2 | |||
2,754,297 | + | -0.1 | |||
2,754,297 | + | -1.3 | |||
2,754,367 | - | intA | b2622 | 0.15 | -0.2 |
Or see this region's nucleotide sequence