Strain Fitness in Escherichia coli BW25113 around b1037

Experiment: BHIS no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
1,099,106	-	ycdY	b1035	0.44	-1.4
1,099,106	-	ycdY	b1035	0.44	-0.4
1,099,189	+	ycdY	b1035	0.59	+0.2
1,099,270	-	ycdY	b1035	0.73	+0.2
1,099,290	+	ycdY	b1035	0.77	+0.0
1,099,293	-	ycdY	b1035	0.77	-0.7
1,099,293	-	ycdY	b1035	0.77	+0.7
1,099,313	+	ycdY	b1035	0.81	-0.3
1,099,313	+	ycdY	b1035	0.81	-0.8
1,099,355	-	ycdY	b1035	0.89	+0.8
1,099,588	+	ycdZ	b1036	0.14	-0.1
1,099,623	-	ycdZ	b1036	0.21	-0.1
1,099,702	+	ycdZ	b1036	0.37	-0.1
1,099,702	+	ycdZ	b1036	0.37	-0.0
1,099,710	-	ycdZ	b1036	0.39	+0.6
1,099,727	+	ycdZ	b1036	0.42	-1.0
1,099,758	+	ycdZ	b1036	0.49	-0.2
1,099,812	-	ycdZ	b1036	0.60	-0.2
1,099,880	-	ycdZ	b1036	0.73	+0.0
1,099,962	+				+1.8
1,099,987	-				+2.0
1,099,987	-				+3.5
1,100,096	-				-0.1
1,100,152	+				+1.0
1,100,152	+				+0.0
1,100,172	-	csgG	b1037	0.12	+0.6
1,100,172	-	csgG	b1037	0.12	-0.1
1,100,172	-	csgG	b1037	0.12	+0.4
1,100,221	-	csgG	b1037	0.18	+0.3
1,100,223	+	csgG	b1037	0.18	+0.5
1,100,223	+	csgG	b1037	0.18	+1.0
1,100,235	+	csgG	b1037	0.19	-1.1
1,100,249	-	csgG	b1037	0.21	-0.2
1,100,251	-	csgG	b1037	0.21	-0.0
1,100,265	-	csgG	b1037	0.23	+0.0
1,100,363	-	csgG	b1037	0.35	-0.2
1,100,410	-	csgG	b1037	0.40	+0.8
1,100,410	-	csgG	b1037	0.40	-0.2
1,100,521	-	csgG	b1037	0.54	-0.2
1,100,539	+	csgG	b1037	0.56	-0.2
1,100,560	+	csgG	b1037	0.58	+1.4
1,100,560	+	csgG	b1037	0.58	+0.1
1,100,661	+	csgG	b1037	0.70	-0.0
1,100,669	-	csgG	b1037	0.71	-0.3
1,100,669	-	csgG	b1037	0.71	-0.5
1,100,687	+	csgG	b1037	0.74	-0.3
1,100,687	+	csgG	b1037	0.74	+0.6
1,100,708	+	csgG	b1037	0.76	-0.2
1,100,805	+	csgG	b1037	0.88	+0.6
1,100,813	-	csgG	b1037	0.89	-0.4
1,100,848	-				-1.5
1,100,850	+				+0.0
1,100,861	+				+0.6
1,100,866	+				-0.3
1,100,866	+				+0.2
1,100,962	+				+0.4
1,100,969	+				+0.6
1,101,017	-	csgF	b1038	0.20	+1.0
1,101,018	+	csgF	b1038	0.20	+0.9
1,101,061	+	csgF	b1038	0.30	+0.0
1,101,144	+	csgF	b1038	0.50	-0.5
1,101,156	+	csgF	b1038	0.53	-1.6
1,101,176	+	csgF	b1038	0.58	-0.6
1,101,329	-				+1.0
1,101,414	-	csgE	b1039	0.10	+1.0
1,101,436	-	csgE	b1039	0.16	+0.0
1,101,442	-	csgE	b1039	0.17	+1.0
1,101,453	-	csgE	b1039	0.20	-1.0
1,101,547	-	csgE	b1039	0.44	+0.7
1,101,554	-	csgE	b1039	0.46	+1.0
1,101,568	-	csgE	b1039	0.49	+0.3
1,101,568	-	csgE	b1039	0.49	+0.8
1,101,568	-	csgE	b1039	0.49	+1.2
1,101,574	-	csgE	b1039	0.51	-0.4
1,101,584	-	csgE	b1039	0.54	+0.1
1,101,597	-	csgE	b1039	0.57	-1.0
1,101,597	-	csgE	b1039	0.57	+1.0
1,101,615	-	csgE	b1039	0.62	-0.8
1,101,615	-	csgE	b1039	0.62	+0.9
1,101,639	-	csgE	b1039	0.68	-0.1
1,101,655	-	csgE	b1039	0.72	+0.2
1,101,664	-	csgE	b1039	0.74	+1.0
1,101,667	+	csgE	b1039	0.75	+1.0
1,101,669	-	csgE	b1039	0.75	+0.4
1,101,678	-	csgE	b1039	0.78	+0.4
1,101,678	-	csgE	b1039	0.78	-0.4
1,101,685	-	csgE	b1039	0.79	-0.5
1,101,686	-	csgE	b1039	0.80	+1.9
1,101,686	-	csgE	b1039	0.80	-1.0
1,101,690	+	csgE	b1039	0.81	+1.0
1,101,698	-	csgE	b1039	0.83	-0.9
1,101,700	-	csgE	b1039	0.83	+0.8
1,101,700	-	csgE	b1039	0.83	+0.8
1,101,710	+	csgE	b1039	0.86	+1.0
1,101,712	-	csgE	b1039	0.86	+3.0
1,101,779	+				+1.0
1,101,799	-				-0.2