Experiment: M9 no stress control; Anaerobic 48 hr
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rmuC and ubiE are separated by 94 nucleotides ubiE and yigP are separated by 13 nucleotides yigP and ubiB overlap by 4 nucleotides
b3832: rmuC - predicted recombination limiting protein (NCBI), at 4,015,356 to 4,016,783
rmuC
b3833: ubiE - ubiquinone/menaquinone biosynthesis methyltransferase (NCBI), at 4,016,878 to 4,017,633
ubiE
b3834: yigP - hypothetical protein (NCBI), at 4,017,647 to 4,018,252
yigP
b3835: ubiB - putative ubiquinone biosynthesis protein UbiB (NCBI), at 4,018,249 to 4,019,889
ubiB
Position (kb)
4017
4018
4019 Strain fitness (log2 ratio)
-1
0
1 at 4016.671 kb on + strand at 4016.671 kb on + strand at 4016.687 kb on + strand at 4016.687 kb on + strand at 4016.691 kb on - strand at 4016.699 kb on + strand at 4016.702 kb on + strand at 4016.712 kb on - strand at 4016.797 kb on + strand at 4016.797 kb on + strand at 4016.841 kb on - strand at 4016.841 kb on - strand at 4017.662 kb on + strand at 4017.674 kb on + strand at 4017.674 kb on + strand at 4017.698 kb on + strand at 4017.698 kb on + strand at 4017.711 kb on + strand, within yigP at 4017.732 kb on + strand, within yigP at 4017.752 kb on + strand, within yigP at 4017.797 kb on + strand, within yigP at 4017.797 kb on + strand, within yigP at 4017.816 kb on + strand, within yigP at 4017.816 kb on + strand, within yigP at 4017.843 kb on + strand, within yigP at 4017.843 kb on + strand, within yigP at 4017.916 kb on + strand, within yigP at 4017.992 kb on + strand, within yigP at 4017.992 kb on + strand, within yigP at 4018.018 kb on + strand, within yigP at 4018.018 kb on + strand, within yigP at 4018.038 kb on + strand, within yigP
Per-strain Table
Position Strand Gene LocusTag Fraction M9 no stress control; Anaerobic 48 hr remove 4,016,671 + -0.1 4,016,671 + -0.1 4,016,687 + -0.2 4,016,687 + +0.3 4,016,691 - +0.1 4,016,699 + +0.3 4,016,702 + +0.1 4,016,712 - +0.4 4,016,797 + +0.3 4,016,797 + +0.4 4,016,841 - +0.1 4,016,841 - -0.3 4,017,662 + -0.0 4,017,674 + -0.2 4,017,674 + +0.3 4,017,698 + +0.1 4,017,698 + +0.4 4,017,711 + yigP b3834 0.11 +0.7 4,017,732 + yigP b3834 0.14 +0.3 4,017,752 + yigP b3834 0.17 +0.4 4,017,797 + yigP b3834 0.25 +0.4 4,017,797 + yigP b3834 0.25 +0.8 4,017,816 + yigP b3834 0.28 +0.5 4,017,816 + yigP b3834 0.28 +0.5 4,017,843 + yigP b3834 0.32 -0.0 4,017,843 + yigP b3834 0.32 +0.1 4,017,916 + yigP b3834 0.44 +0.4 4,017,992 + yigP b3834 0.57 -0.3 4,017,992 + yigP b3834 0.57 -0.1 4,018,018 + yigP b3834 0.61 +0.1 4,018,018 + yigP b3834 0.61 +0.2 4,018,038 + yigP b3834 0.65 -0.7
Or see this region's nucleotide sequence