Experiment: M9 no stress control; Anaerobic 48 hr
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhbJ and npr overlap by 4 nucleotides npr and yrbL are separated by 213 nucleotides yrbL and mtgA overlap by 4 nucleotides mtgA and yhbL overlap by 4 nucleotides
b3205: yhbJ - hypothetical protein (NCBI), at 3,345,137 to 3,345,991
yhbJ
b3206: npr - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI), at 3,345,988 to 3,346,260
npr
b3207: yrbL - hypothetical protein (NCBI), at 3,346,474 to 3,347,106
yrbL
b3208: mtgA - monofunctional biosynthetic peptidoglycan transglycosylase (NCBI), at 3,347,103 to 3,347,831
mtgA
b3209: yhbL - sigma cross-reacting protein 27A (SCRP-27A) (VIMSS), at 3,347,828 to 3,348,481
yhbL
Position (kb)
3346
3347
3348 Strain fitness (log2 ratio)
-2
-1
0
1 at 3345.698 kb on + strand, within yhbJ at 3345.698 kb on + strand, within yhbJ at 3345.735 kb on + strand, within yhbJ at 3345.863 kb on - strand, within yhbJ at 3345.863 kb on - strand, within yhbJ at 3345.892 kb on - strand, within yhbJ at 3345.892 kb on - strand, within yhbJ at 3345.909 kb on - strand at 3345.953 kb on + strand at 3346.034 kb on - strand, within npr at 3346.147 kb on + strand, within npr at 3346.173 kb on - strand, within npr at 3346.174 kb on + strand, within npr at 3346.174 kb on + strand, within npr at 3346.186 kb on - strand, within npr at 3346.196 kb on - strand, within npr at 3346.286 kb on + strand at 3346.286 kb on + strand at 3346.444 kb on - strand at 3346.487 kb on - strand at 3346.655 kb on + strand, within yrbL at 3346.688 kb on - strand, within yrbL at 3346.697 kb on - strand, within yrbL at 3346.795 kb on + strand, within yrbL at 3346.809 kb on + strand, within yrbL at 3346.921 kb on + strand, within yrbL at 3346.921 kb on + strand, within yrbL at 3346.932 kb on - strand, within yrbL at 3346.965 kb on - strand, within yrbL at 3346.972 kb on + strand, within yrbL at 3346.980 kb on - strand, within yrbL at 3346.980 kb on - strand, within yrbL at 3346.986 kb on + strand, within yrbL at 3346.986 kb on + strand, within yrbL at 3347.046 kb on + strand at 3347.086 kb on - strand at 3347.092 kb on - strand at 3347.111 kb on + strand at 3347.151 kb on - strand at 3347.178 kb on + strand, within mtgA at 3347.178 kb on + strand, within mtgA at 3347.178 kb on + strand, within mtgA at 3347.178 kb on + strand, within mtgA at 3347.184 kb on + strand, within mtgA at 3347.192 kb on - strand, within mtgA at 3347.205 kb on - strand, within mtgA at 3347.205 kb on - strand, within mtgA at 3347.226 kb on + strand, within mtgA at 3347.226 kb on + strand, within mtgA at 3347.278 kb on + strand, within mtgA at 3347.278 kb on + strand, within mtgA at 3347.311 kb on + strand, within mtgA at 3347.311 kb on + strand, within mtgA at 3347.386 kb on + strand at 3347.400 kb on + strand, within mtgA at 3347.430 kb on + strand, within mtgA at 3347.466 kb on + strand, within mtgA at 3347.515 kb on + strand, within mtgA at 3347.520 kb on + strand, within mtgA at 3347.528 kb on - strand, within mtgA at 3347.528 kb on - strand, within mtgA at 3347.534 kb on - strand, within mtgA at 3347.621 kb on + strand, within mtgA at 3347.634 kb on - strand, within mtgA at 3347.634 kb on - strand, within mtgA at 3347.710 kb on - strand, within mtgA at 3347.713 kb on + strand, within mtgA at 3347.725 kb on + strand, within mtgA at 3347.725 kb on + strand, within mtgA at 3347.738 kb on - strand, within mtgA at 3347.778 kb on - strand at 3347.820 kb on - strand at 3347.904 kb on + strand, within yhbL at 3347.904 kb on + strand, within yhbL at 3347.911 kb on - strand, within yhbL at 3347.916 kb on - strand, within yhbL at 3347.975 kb on - strand, within yhbL at 3348.075 kb on + strand, within yhbL
Per-strain Table
Position Strand Gene LocusTag Fraction M9 no stress control; Anaerobic 48 hr remove 3,345,698 + yhbJ b3205 0.66 +0.2 3,345,698 + yhbJ b3205 0.66 -1.5 3,345,735 + yhbJ b3205 0.70 -0.9 3,345,863 - yhbJ b3205 0.85 -1.3 3,345,863 - yhbJ b3205 0.85 -1.0 3,345,892 - yhbJ b3205 0.88 -2.7 3,345,892 - yhbJ b3205 0.88 -2.6 3,345,909 - -1.5 3,345,953 + -0.0 3,346,034 - npr b3206 0.17 -0.0 3,346,147 + npr b3206 0.58 +0.8 3,346,173 - npr b3206 0.68 +0.2 3,346,174 + npr b3206 0.68 -0.3 3,346,174 + npr b3206 0.68 +0.0 3,346,186 - npr b3206 0.73 +0.3 3,346,196 - npr b3206 0.76 +0.0 3,346,286 + -0.6 3,346,286 + +0.2 3,346,444 - -0.3 3,346,487 - +0.4 3,346,655 + yrbL b3207 0.29 -0.0 3,346,688 - yrbL b3207 0.34 +0.9 3,346,697 - yrbL b3207 0.35 +1.2 3,346,795 + yrbL b3207 0.51 +0.6 3,346,809 + yrbL b3207 0.53 -0.3 3,346,921 + yrbL b3207 0.71 +0.2 3,346,921 + yrbL b3207 0.71 +0.1 3,346,932 - yrbL b3207 0.72 +0.1 3,346,965 - yrbL b3207 0.78 -1.1 3,346,972 + yrbL b3207 0.79 +0.2 3,346,980 - yrbL b3207 0.80 +0.6 3,346,980 - yrbL b3207 0.80 +1.0 3,346,986 + yrbL b3207 0.81 +0.2 3,346,986 + yrbL b3207 0.81 +0.1 3,347,046 + -0.0 3,347,086 - +0.1 3,347,092 - +0.1 3,347,111 + -0.3 3,347,151 - -0.0 3,347,178 + mtgA b3208 0.10 -0.8 3,347,178 + mtgA b3208 0.10 -0.2 3,347,178 + mtgA b3208 0.10 +0.2 3,347,178 + mtgA b3208 0.10 +0.2 3,347,184 + mtgA b3208 0.11 -0.2 3,347,192 - mtgA b3208 0.12 +0.1 3,347,205 - mtgA b3208 0.14 -1.5 3,347,205 - mtgA b3208 0.14 -1.6 3,347,226 + mtgA b3208 0.17 -0.4 3,347,226 + mtgA b3208 0.17 -0.8 3,347,278 + mtgA b3208 0.24 -0.4 3,347,278 + mtgA b3208 0.24 -0.1 3,347,311 + mtgA b3208 0.29 -0.3 3,347,311 + mtgA b3208 0.29 -0.0 3,347,386 + -0.2 3,347,400 + mtgA b3208 0.41 -0.5 3,347,430 + mtgA b3208 0.45 -0.0 3,347,466 + mtgA b3208 0.50 -0.0 3,347,515 + mtgA b3208 0.57 -1.2 3,347,520 + mtgA b3208 0.57 -1.9 3,347,528 - mtgA b3208 0.58 -0.1 3,347,528 - mtgA b3208 0.58 -0.2 3,347,534 - mtgA b3208 0.59 -0.3 3,347,621 + mtgA b3208 0.71 +0.0 3,347,634 - mtgA b3208 0.73 +1.0 3,347,634 - mtgA b3208 0.73 +1.2 3,347,710 - mtgA b3208 0.83 -0.0 3,347,713 + mtgA b3208 0.84 -0.2 3,347,725 + mtgA b3208 0.85 +0.1 3,347,725 + mtgA b3208 0.85 -0.3 3,347,738 - mtgA b3208 0.87 -1.0 3,347,778 - +0.1 3,347,820 - +0.3 3,347,904 + yhbL b3209 0.12 -0.1 3,347,904 + yhbL b3209 0.12 +0.1 3,347,911 - yhbL b3209 0.13 +0.3 3,347,916 - yhbL b3209 0.13 +0.1 3,347,975 - yhbL b3209 0.22 +0.5 3,348,075 + yhbL b3209 0.38 -1.3
Or see this region's nucleotide sequence