Strain Fitness in Escherichia coli BW25113 around b1139

Experiment: M9 no stress control; Anaerobic 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Anaerobic 48 hr
1,197,326	-	ymfE	b1138	0.81	-0.3
1,197,530	-				-0.5
1,197,781	+				+1.1
1,198,462	+	lit	b1139	0.61	+1.1
1,198,531	+	lit	b1139	0.69	+1.1
1,198,539	-	lit	b1139	0.69	+3.7
1,198,539	-	lit	b1139	0.69	+1.0
1,198,560	-	lit	b1139	0.72	-0.0
1,198,564	+	lit	b1139	0.72	+1.1
1,198,564	+	lit	b1139	0.72	+1.1
1,198,572	-	lit	b1139	0.73	+1.4
1,198,618	+	lit	b1139	0.78	+1.1
1,198,620	-	lit	b1139	0.79	-0.6
1,198,625	-	lit	b1139	0.79	+1.1
1,198,626	-	lit	b1139	0.79	+1.1
1,198,626	-	lit	b1139	0.79	-0.8
1,198,657	-	lit	b1139	0.83	+0.0
1,198,657	-	lit	b1139	0.83	+0.3
1,198,677	+	lit	b1139	0.85	+1.1
1,198,681	-	lit	b1139	0.85	+0.8
1,198,684	-	lit	b1139	0.86	-1.2
1,198,684	-	lit	b1139	0.86	-0.2
1,198,688	+	lit	b1139	0.86	+2.1
1,198,693	-	lit	b1139	0.87	+0.1
1,198,695	-	lit	b1139	0.87	+1.9
1,198,696	-	lit	b1139	0.87	+0.7
1,198,816	-				-0.8
1,198,884	-				+2.1
1,198,915	-				+0.9
1,198,915	-				-0.3
1,198,915	-				-0.4
1,198,932	-				+1.5
1,198,988	-				+0.7
1,199,013	-				-0.1
1,199,056	-	intE	b1140	0.14	-0.0
1,199,056	-	intE	b1140	0.14	-0.8
1,199,086	-	intE	b1140	0.16	-0.2
1,199,086	-	intE	b1140	0.16	-0.8
1,199,130	-	intE	b1140	0.20	+0.2
1,199,130	-	intE	b1140	0.20	-0.6
1,199,145	-	intE	b1140	0.22	+0.3
1,199,147	+	intE	b1140	0.22	-1.6
1,199,155	-	intE	b1140	0.22	-0.6
1,199,177	+	intE	b1140	0.24	-0.4
1,199,177	+	intE	b1140	0.24	-0.0
1,199,177	+	intE	b1140	0.24	+0.7
1,199,185	-	intE	b1140	0.25	+0.1
1,199,185	-	intE	b1140	0.25	+0.2
1,199,185	-	intE	b1140	0.25	-0.5
1,199,187	+	intE	b1140	0.25	-0.5
1,199,187	+	intE	b1140	0.25	+0.7
1,199,188	+	intE	b1140	0.25	+0.9
1,199,189	+	intE	b1140	0.25	-1.1
1,199,195	-	intE	b1140	0.26	-0.4
1,199,197	+	intE	b1140	0.26	+0.4
1,199,199	-	intE	b1140	0.26	+1.4
1,199,207	+	intE	b1140	0.27	-0.3
1,199,207	+	intE	b1140	0.27	+0.7
1,199,208	-	intE	b1140	0.27	+0.4
1,199,216	-	intE	b1140	0.28	-0.8
1,199,295	+	intE	b1140	0.35	+0.2
1,199,369	+	intE	b1140	0.41	+0.3
1,199,369	+	intE	b1140	0.41	+0.2
1,199,378	+	intE	b1140	0.42	-0.0
1,199,378	-	intE	b1140	0.42	+0.0
1,199,379	-	intE	b1140	0.42	+0.1
1,199,446	-	intE	b1140	0.48	-0.7
1,199,492	+	intE	b1140	0.52	-0.6
1,199,505	+	intE	b1140	0.53	+0.4
1,199,534	-	intE	b1140	0.56	-0.2
1,199,550	+	intE	b1140	0.57	+0.0
1,199,600	+	intE	b1140	0.62	+0.1
1,199,631	-	intE	b1140	0.65	+0.3
1,199,631	-	intE	b1140	0.65	+0.4
1,199,681	-	intE	b1140	0.69	+0.0
1,199,692	+	intE	b1140	0.70	-0.6
1,199,692	+	intE	b1140	0.70	+0.4
1,199,736	-	intE	b1140	0.74	-0.7
1,199,742	+	intE	b1140	0.74	-0.3
1,199,742	+	intE	b1140	0.74	-0.4