Experiment: M9 no stress control; Aerobic 48 hr
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yfgH and yfgI are separated by 15 nucleotides yfgI and guaA are separated by 92 nucleotides guaA and guaB are separated by 68 nucleotides
b2505: yfgH - predicted outer membrane lipoprotein (NCBI), at 2,627,814 to 2,628,332
yfgH
b2506: yfgI - hypothetical protein (NCBI), at 2,628,348 to 2,628,887
yfgI
b2507: guaA - bifunctional GMP synthase/glutamine amidotransferase protein (NCBI), at 2,628,980 to 2,630,557
guaA
b2508: guaB - inositol-5-monophosphate dehydrogenase (NCBI), at 2,630,626 to 2,632,092
guaB
Position (kb)
2628
2629
2630
2631 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2627.996 kb on - strand, within yfgH at 2628.036 kb on + strand, within yfgH at 2628.056 kb on - strand, within yfgH at 2628.058 kb on + strand, within yfgH at 2628.060 kb on + strand, within yfgH at 2628.067 kb on + strand, within yfgH at 2628.068 kb on - strand, within yfgH at 2628.109 kb on - strand, within yfgH at 2628.109 kb on - strand, within yfgH at 2628.114 kb on - strand, within yfgH at 2628.126 kb on + strand, within yfgH at 2628.145 kb on + strand, within yfgH at 2628.178 kb on - strand, within yfgH at 2628.196 kb on - strand, within yfgH at 2628.202 kb on + strand, within yfgH at 2628.210 kb on + strand, within yfgH at 2628.210 kb on + strand, within yfgH at 2628.212 kb on + strand, within yfgH at 2628.217 kb on + strand, within yfgH at 2628.225 kb on - strand, within yfgH at 2628.227 kb on + strand, within yfgH at 2628.230 kb on - strand, within yfgH at 2628.255 kb on + strand, within yfgH at 2628.267 kb on + strand, within yfgH at 2628.316 kb on + strand at 2628.316 kb on + strand at 2628.381 kb on + strand at 2628.381 kb on + strand at 2628.562 kb on + strand, within yfgI at 2628.675 kb on - strand, within yfgI at 2628.763 kb on - strand, within yfgI at 2628.788 kb on - strand, within yfgI at 2628.788 kb on - strand, within yfgI at 2628.938 kb on + strand at 2628.972 kb on - strand at 2630.612 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 no stress control; Aerobic 48 hr remove 2,627,996 - yfgH b2505 0.35 -2.9 2,628,036 + yfgH b2505 0.43 +1.9 2,628,056 - yfgH b2505 0.47 -0.3 2,628,058 + yfgH b2505 0.47 +0.1 2,628,060 + yfgH b2505 0.47 -0.2 2,628,067 + yfgH b2505 0.49 -1.3 2,628,068 - yfgH b2505 0.49 -0.4 2,628,109 - yfgH b2505 0.57 -0.5 2,628,109 - yfgH b2505 0.57 +0.8 2,628,114 - yfgH b2505 0.58 -0.0 2,628,126 + yfgH b2505 0.60 +0.2 2,628,145 + yfgH b2505 0.64 -0.4 2,628,178 - yfgH b2505 0.70 +0.3 2,628,196 - yfgH b2505 0.74 -0.4 2,628,202 + yfgH b2505 0.75 -0.2 2,628,210 + yfgH b2505 0.76 -0.5 2,628,210 + yfgH b2505 0.76 +0.1 2,628,212 + yfgH b2505 0.77 +0.7 2,628,217 + yfgH b2505 0.78 +0.3 2,628,225 - yfgH b2505 0.79 +0.9 2,628,227 + yfgH b2505 0.80 -0.1 2,628,230 - yfgH b2505 0.80 +0.1 2,628,255 + yfgH b2505 0.85 -0.6 2,628,267 + yfgH b2505 0.87 -0.2 2,628,316 + -0.4 2,628,316 + +0.1 2,628,381 + +0.7 2,628,381 + +0.6 2,628,562 + yfgI b2506 0.40 -0.1 2,628,675 - yfgI b2506 0.61 +0.7 2,628,763 - yfgI b2506 0.77 -0.9 2,628,788 - yfgI b2506 0.81 +0.1 2,628,788 - yfgI b2506 0.81 -0.1 2,628,938 + +1.3 2,628,972 - +0.2 2,630,612 - +0.6
Or see this region's nucleotide sequence