Strain Fitness in Escherichia coli BW25113 around b3939

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
4,125,713	-	yiiX	b3937	0.66	+0.6
4,125,713	-	yiiX	b3937	0.66	+0.6
4,125,758	+	yiiX	b3937	0.74	-0.1
4,125,768	-	yiiX	b3937	0.75	-0.1
4,125,784	+	yiiX	b3937	0.78	-0.2
4,125,791	-	yiiX	b3937	0.79	-0.3
4,125,792	-	yiiX	b3937	0.79	+0.8
4,125,792	-	yiiX	b3937	0.79	-0.7
4,125,903	-				-0.2
4,125,948	+				+0.1
4,125,969	-				+0.3
4,125,969	-				-0.3
4,126,055	+				+0.0
4,126,073	+				-0.9
4,126,073	+				-0.3
4,126,073	+				+0.6
4,126,073	+				+2.4
4,126,081	-				-0.5
4,126,123	-				+0.7
4,126,123	-				+0.4
4,126,272	-				+1.2
4,126,323	+	metJ	b3938	0.70	-0.4
4,126,373	-	metJ	b3938	0.86	+0.2
4,126,373	-	metJ	b3938	0.86	-0.4
4,126,389	-				-0.8
4,126,414	+				-0.8
4,126,414	+				+0.2
4,126,415	-				-0.6
4,126,422	-				+0.6
4,126,524	-				+0.1
4,126,524	-				-0.1
4,126,526	+				+0.0
4,126,644	-				-0.2
4,126,648	-				-0.9
4,126,707	-				-2.0
4,126,717	-				-1.6
4,126,717	-				-2.0
4,126,719	+				-1.8
4,126,722	+				-2.8
4,126,759	-				-1.0
4,126,900	+	metB	b3939	0.18	-0.3
4,126,900	+	metB	b3939	0.18	-1.5
4,126,902	-	metB	b3939	0.18	-0.9
4,126,908	-	metB	b3939	0.18	-0.7
4,126,910	+	metB	b3939	0.19	-1.8
4,126,913	-	metB	b3939	0.19	-0.6
4,127,015	+	metB	b3939	0.28	-1.9
4,127,023	+	metB	b3939	0.28	-0.6
4,127,042	+	metB	b3939	0.30	-1.0
4,127,042	+	metB	b3939	0.30	-2.9
4,127,112	-	metB	b3939	0.36	-1.4
4,127,120	+	metB	b3939	0.37	-1.9
4,127,152	-	metB	b3939	0.39	-2.1
4,127,203	-	metB	b3939	0.44	-1.1
4,127,232	+	metB	b3939	0.46	-1.6
4,127,273	+	metB	b3939	0.50	-1.4
4,127,273	+	metB	b3939	0.50	-1.9
4,127,373	-	metB	b3939	0.58	-1.4
4,127,400	+	metB	b3939	0.61	-2.1
4,127,400	+	metB	b3939	0.61	-0.9
4,127,410	+	metB	b3939	0.62	-1.6
4,127,453	-	metB	b3939	0.65	-1.1
4,127,592	-	metB	b3939	0.77	-1.5
4,127,604	-	metB	b3939	0.78	-1.1
4,127,663	+	metB	b3939	0.83	-0.9
4,127,663	+	metB	b3939	0.83	-1.0
4,127,709	+	metB	b3939	0.87	-1.4
4,127,719	+	metB	b3939	0.88	-1.4
4,127,720	+	metB	b3939	0.88	-3.1
4,127,720	+	metB	b3939	0.88	-1.4
4,127,725	+	metB	b3939	0.89	-1.2
4,127,737	-	metB	b3939	0.90	-1.2
4,127,737	-	metB	b3939	0.90	-0.2
4,127,788	+				-1.3
4,127,796	-				-1.6
4,127,796	-				-2.2
4,127,796	-				-0.3
4,127,926	-				+1.2
4,127,978	-				+1.2
4,128,062	-				+1.2
4,128,238	-	metL	b3940	0.16	+1.2
4,128,370	+	metL	b3940	0.21	+1.2
4,128,487	+	metL	b3940	0.26	+1.2