Strain Fitness in Escherichia coli BW25113 around b1159

Experiment: M9 with Methotrexate 1.98 mM 24 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Methotrexate 1.98 mM 24 hr
1,208,575	-	stfE	b1157	0.47	+0.5
1,208,576	-	stfE	b1157	0.47	+0.5
1,208,586	-	stfE	b1157	0.49	+0.2
1,208,604	-	stfE	b1157	0.52	-0.0
1,208,604	-	stfE	b1157	0.52	+0.5
1,208,604	-	stfE	b1157	0.52	-0.3
1,208,606	-	stfE	b1157	0.53	-0.1
1,208,609	-	stfE	b1157	0.53	-0.1
1,208,638	-	stfE	b1157	0.59	+0.0
1,208,642	-	stfE	b1157	0.60	+0.2
1,208,642	-	stfE	b1157	0.60	-0.1
1,208,642	-	stfE	b1157	0.60	-0.4
1,208,648	+	stfE	b1157	0.61	+0.9
1,208,752	+	stfE	b1157	0.82	+0.2
1,208,756	-	stfE	b1157	0.83	-0.3
1,208,791	-	stfE	b1157	0.90	-0.3
1,208,819	+				+0.5
1,208,838	-				-0.6
1,208,899	-				+0.5
1,208,946	+				-0.1
1,208,946	+				-0.6
1,208,964	-	pin	b1158	0.10	-0.2
1,208,964	-	pin	b1158	0.10	-1.2
1,208,968	+	pin	b1158	0.11	-0.5
1,209,015	-	pin	b1158	0.19	+0.5
1,209,110	-	pin	b1158	0.36	+1.2
1,209,296	+	pin	b1158	0.70	-0.1
1,209,296	+	pin	b1158	0.70	-0.2
1,209,306	+	pin	b1158	0.72	-0.7
1,209,306	+				-0.0
1,209,316	+	pin	b1158	0.74	-0.3
1,209,316	+	pin	b1158	0.74	-0.5
1,209,333	+	pin	b1158	0.77	+0.0
1,209,348	+	pin	b1158	0.79	-0.0
1,209,397	+	pin	b1158	0.88	-0.1
1,209,408	+				+0.0
1,209,423	+				+0.2
1,209,612	+				+0.2
1,209,612	+				+0.6
1,209,620	+				+0.5
1,209,635	+				+0.8
1,209,648	+				-0.1
1,209,648	+				+0.5
1,209,663	+	mcrA	b1159	0.11	-0.4
1,209,743	+	mcrA	b1159	0.21	+0.2
1,209,769	+	mcrA	b1159	0.24	+0.8
1,210,309	+	mcrA	b1159	0.89	+1.2
1,210,442	-				+1.2
1,210,631	+				+1.2
1,210,631	+				+1.2
1,210,646	+				+1.8
1,210,646	+				-1.6
1,210,646	+				-0.5
1,210,655	+	icdC	b4519	0.12	+0.2
1,210,664	+	icdC	b4519	0.17	-0.1
1,210,666	+	icdC	b4519	0.18	+1.4
1,210,666	+	icdC	b4519	0.18	+0.7
1,210,684	+	icdC	b4519	0.29	+0.4
1,210,710	+	icdC	b4519	0.45	-1.6
1,210,733	+	icdC	b4519	0.59	+0.5
1,210,745	+	icdC	b4519	0.66	-0.9
1,210,753	+	icdC	b4519	0.71	+1.2
1,210,753	+	icdC	b4519	0.71	-0.4
1,210,753	+	icdC	b4519	0.71	-0.9
1,210,753	+	icdC	b4519	0.71	+0.4
1,210,769	+	icdC	b4519	0.81	-0.2
1,210,794	+				+0.1
1,210,812	+				+2.2
1,210,812	+				-1.3
1,210,982	-	elbA	b1160	0.24	-0.9
1,210,987	-	elbA	b1160	0.26	+1.2