Strain Fitness in Escherichia coli BW25113 around b2837
Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr |
---|---|---|---|---|---|
remove | |||||
2,973,699 | - | aas | b2836 | 0.84 | +0.4 |
2,973,741 | + | aas | b2836 | 0.86 | +0.0 |
2,973,754 | + | aas | b2836 | 0.87 | +1.4 |
2,973,831 | - | +0.6 | |||
2,973,831 | - | +0.2 | |||
2,973,842 | - | -0.4 | |||
2,973,894 | - | +0.3 | |||
2,973,916 | + | +0.6 | |||
2,973,918 | + | +0.2 | |||
2,973,974 | - | +0.2 | |||
2,973,995 | + | +0.2 | |||
2,974,053 | - | -0.1 | |||
2,974,055 | + | +0.3 | |||
2,974,055 | + | -0.7 | |||
2,974,090 | + | +0.1 | |||
2,974,090 | + | -0.1 | |||
2,974,097 | - | -0.3 | |||
2,974,148 | + | rygA | b4444 | 0.27 | -0.7 |
2,974,161 | - | rygA | b4444 | 0.42 | -0.2 |
2,974,163 | - | rygA | b4444 | 0.44 | +0.7 |
2,974,163 | - | rygA | b4444 | 0.44 | +0.8 |
2,974,168 | - | rygA | b4444 | 0.50 | +0.2 |
2,974,174 | - | rygA | b4444 | 0.57 | -0.9 |
2,974,183 | - | rygA | b4444 | 0.67 | -0.4 |
2,974,340 | + | omrB | b4445 | 0.17 | -0.0 |
2,974,353 | - | omrB | b4445 | 0.33 | -0.0 |
2,974,363 | - | omrB | b4445 | 0.45 | -0.4 |
2,974,381 | - | omrB | b4445 | 0.67 | +0.4 |
2,974,429 | - | +0.2 | |||
2,974,581 | - | -0.0 | |||
2,974,635 | + | +0.4 | |||
2,974,635 | + | +0.5 | |||
2,974,636 | - | -1.4 | |||
2,974,636 | - | -0.9 | |||
2,974,684 | + | -0.0 | |||
2,974,684 | + | -0.2 | |||
2,974,723 | + | +0.2 | |||
2,974,733 | + | galR | b2837 | 0.11 | -0.6 |
2,974,733 | + | galR | b2837 | 0.11 | +0.3 |
2,974,741 | - | galR | b2837 | 0.12 | +0.6 |
2,974,741 | - | galR | b2837 | 0.12 | -0.2 |
2,974,751 | + | galR | b2837 | 0.13 | -0.2 |
2,974,793 | + | galR | b2837 | 0.17 | -1.3 |
2,974,793 | + | galR | b2837 | 0.17 | +0.1 |
2,975,062 | - | galR | b2837 | 0.43 | -0.7 |
2,975,089 | + | galR | b2837 | 0.45 | -0.4 |
2,975,111 | - | galR | b2837 | 0.47 | +0.1 |
2,975,111 | - | galR | b2837 | 0.47 | -0.1 |
2,975,152 | - | galR | b2837 | 0.51 | +0.4 |
2,975,168 | + | galR | b2837 | 0.53 | -0.4 |
2,975,176 | - | galR | b2837 | 0.54 | -0.7 |
2,975,348 | + | galR | b2837 | 0.70 | -0.3 |
2,975,354 | - | galR | b2837 | 0.71 | -0.1 |
2,975,357 | + | galR | b2837 | 0.71 | -0.0 |
2,975,399 | + | galR | b2837 | 0.75 | -0.3 |
2,975,399 | + | galR | b2837 | 0.75 | +0.2 |
2,975,406 | - | galR | b2837 | 0.76 | -0.7 |
2,975,406 | - | galR | b2837 | 0.76 | -0.4 |
2,975,407 | - | galR | b2837 | 0.76 | -0.0 |
2,975,457 | + | galR | b2837 | 0.81 | -0.2 |
2,975,457 | + | galR | b2837 | 0.81 | -0.5 |
2,975,478 | - | galR | b2837 | 0.83 | -0.9 |
2,975,516 | - | galR | b2837 | 0.87 | -1.5 |
2,975,627 | - | -0.2 | |||
2,975,794 | - | lysA | b2838 | 0.11 | -4.3 |
2,975,794 | - | lysA | b2838 | 0.11 | -4.5 |
2,975,806 | - | lysA | b2838 | 0.12 | -5.4 |
2,975,816 | - | lysA | b2838 | 0.12 | -5.3 |
2,975,871 | + | lysA | b2838 | 0.17 | -4.7 |
2,975,883 | - | lysA | b2838 | 0.18 | -3.3 |
2,975,917 | + | lysA | b2838 | 0.20 | -5.7 |
2,975,984 | + | lysA | b2838 | 0.26 | -5.7 |
2,976,036 | - | lysA | b2838 | 0.30 | -5.1 |
2,976,036 | - | lysA | b2838 | 0.30 | -4.6 |
2,976,041 | - | lysA | b2838 | 0.30 | -4.6 |
2,976,216 | - | lysA | b2838 | 0.44 | -4.9 |
2,976,302 | + | lysA | b2838 | 0.51 | -4.4 |
2,976,305 | + | lysA | b2838 | 0.51 | -4.3 |
2,976,305 | + | lysA | b2838 | 0.51 | -4.6 |
2,976,305 | - | lysA | b2838 | 0.51 | -5.9 |
2,976,305 | - | lysA | b2838 | 0.51 | -5.6 |
2,976,313 | - | lysA | b2838 | 0.52 | -4.6 |
2,976,319 | - | lysA | b2838 | 0.52 | -6.0 |
2,976,345 | - | lysA | b2838 | 0.54 | -3.6 |
2,976,397 | - | lysA | b2838 | 0.58 | -7.1 |
2,976,401 | + | lysA | b2838 | 0.59 | -4.3 |
2,976,420 | + | lysA | b2838 | 0.60 | -6.5 |
2,976,424 | - | lysA | b2838 | 0.61 | -5.0 |
2,976,424 | - | lysA | b2838 | 0.61 | -5.5 |
2,976,428 | - | lysA | b2838 | 0.61 | -4.3 |
2,976,428 | - | lysA | b2838 | 0.61 | -5.1 |
2,976,479 | - | lysA | b2838 | 0.65 | -4.8 |
2,976,494 | + | lysA | b2838 | 0.66 | -6.9 |
2,976,501 | + | lysA | b2838 | 0.67 | -3.6 |
2,976,501 | + | lysA | b2838 | 0.67 | -4.3 |
2,976,532 | - | lysA | b2838 | 0.69 | -4.3 |
2,976,532 | - | lysA | b2838 | 0.69 | -4.5 |
2,976,554 | - | lysA | b2838 | 0.71 | -5.7 |
Or see this region's nucleotide sequence