Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fepE and fepC overlap by 4 nucleotides fepC and fepG overlap by 4 nucleotides fepG and fepD overlap by 4 nucleotides
b0587: fepE - regulator of length of O-antigen component of lipopolysaccharide chains (NCBI), at 617,477 to 618,610
fepE
b0588: fepC - iron-enterobactin transporter subunit (NCBI), at 618,607 to 619,422
fepC
b0589: fepG - iron-enterobactin transporter subunit (NCBI), at 619,419 to 620,411
fepG
b0590: fepD - iron-enterobactin transporter subunit (NCBI), at 620,408 to 621,412
fepD
Position (kb) 619
620
621 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 618.457 kb on + strand, within fepE at 618.484 kb on + strand, within fepE at 618.498 kb on + strand at 618.500 kb on - strand at 618.500 kb on - strand at 618.520 kb on - strand at 618.545 kb on - strand at 618.561 kb on - strand at 618.561 kb on - strand at 618.598 kb on - strand at 618.721 kb on + strand, within fepC at 618.725 kb on - strand, within fepC at 618.815 kb on - strand, within fepC at 618.815 kb on - strand, within fepC at 618.876 kb on - strand, within fepC at 618.905 kb on - strand, within fepC at 618.927 kb on - strand, within fepC at 618.935 kb on - strand, within fepC at 618.935 kb on - strand, within fepC at 618.970 kb on - strand, within fepC at 619.003 kb on + strand, within fepC at 619.038 kb on + strand, within fepC at 619.066 kb on - strand, within fepC at 619.131 kb on - strand, within fepC at 619.259 kb on - strand, within fepC at 619.259 kb on - strand, within fepC at 619.261 kb on + strand, within fepC at 619.375 kb on + strand at 619.568 kb on - strand, within fepG at 619.568 kb on - strand, within fepG at 619.680 kb on - strand, within fepG at 619.685 kb on - strand, within fepG at 619.685 kb on - strand, within fepG at 619.750 kb on - strand, within fepG at 619.750 kb on - strand, within fepG at 619.808 kb on + strand, within fepG at 619.812 kb on + strand, within fepG at 619.827 kb on - strand, within fepG at 619.870 kb on - strand, within fepG at 619.872 kb on + strand, within fepG at 619.948 kb on - strand, within fepG at 620.042 kb on - strand, within fepG at 620.050 kb on - strand, within fepG at 620.050 kb on - strand, within fepG at 620.203 kb on - strand, within fepG at 620.205 kb on + strand, within fepG at 620.205 kb on + strand, within fepG at 620.263 kb on - strand, within fepG at 620.336 kb on - strand at 620.392 kb on - strand at 620.482 kb on - strand at 620.514 kb on - strand, within fepD at 620.634 kb on - strand, within fepD at 620.653 kb on - strand, within fepD at 620.653 kb on - strand, within fepD at 620.664 kb on - strand, within fepD at 620.672 kb on - strand, within fepD at 620.728 kb on - strand, within fepD at 620.749 kb on + strand, within fepD at 620.749 kb on + strand, within fepD at 620.749 kb on + strand, within fepD at 620.780 kb on - strand, within fepD at 620.808 kb on + strand, within fepD at 620.808 kb on + strand, within fepD at 620.892 kb on + strand, within fepD at 620.900 kb on - strand, within fepD at 620.964 kb on - strand, within fepD at 620.964 kb on - strand, within fepD at 620.970 kb on + strand, within fepD at 620.970 kb on + strand, within fepD at 621.018 kb on - strand, within fepD at 621.228 kb on - strand, within fepD at 621.295 kb on - strand, within fepD at 621.295 kb on - strand, within fepD at 621.331 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr remove 618,457 + fepE b0587 0.86 -0.2 618,484 + fepE b0587 0.89 +0.9 618,498 + +0.1 618,500 - +0.8 618,500 - -0.1 618,520 - -0.6 618,545 - +0.0 618,561 - -0.0 618,561 - -0.3 618,598 - +0.1 618,721 + fepC b0588 0.14 -2.1 618,725 - fepC b0588 0.14 -2.4 618,815 - fepC b0588 0.25 -2.6 618,815 - fepC b0588 0.25 -2.2 618,876 - fepC b0588 0.33 -2.4 618,905 - fepC b0588 0.37 -2.1 618,927 - fepC b0588 0.39 -1.6 618,935 - fepC b0588 0.40 -4.0 618,935 - fepC b0588 0.40 -2.5 618,970 - fepC b0588 0.44 -2.3 619,003 + fepC b0588 0.49 -1.9 619,038 + fepC b0588 0.53 -2.5 619,066 - fepC b0588 0.56 -2.4 619,131 - fepC b0588 0.64 -1.8 619,259 - fepC b0588 0.80 -3.1 619,259 - fepC b0588 0.80 -2.1 619,261 + fepC b0588 0.80 -2.8 619,375 + -2.4 619,568 - fepG b0589 0.15 -1.8 619,568 - fepG b0589 0.15 -0.7 619,680 - fepG b0589 0.26 -2.4 619,685 - fepG b0589 0.27 -0.9 619,685 - fepG b0589 0.27 -3.1 619,750 - fepG b0589 0.33 -2.5 619,750 - fepG b0589 0.33 -2.5 619,808 + fepG b0589 0.39 -2.5 619,812 + fepG b0589 0.40 -2.5 619,827 - fepG b0589 0.41 -2.3 619,870 - fepG b0589 0.45 -2.7 619,872 + fepG b0589 0.46 -4.7 619,948 - fepG b0589 0.53 -2.1 620,042 - fepG b0589 0.63 -2.5 620,050 - fepG b0589 0.64 -2.4 620,050 - fepG b0589 0.64 -2.5 620,203 - fepG b0589 0.79 -0.8 620,205 + fepG b0589 0.79 -1.8 620,205 + fepG b0589 0.79 -0.8 620,263 - fepG b0589 0.85 -2.0 620,336 - -3.1 620,392 - -1.8 620,482 - -3.7 620,514 - fepD b0590 0.11 -2.6 620,634 - fepD b0590 0.22 -2.1 620,653 - fepD b0590 0.24 -2.4 620,653 - fepD b0590 0.24 -1.9 620,664 - fepD b0590 0.25 -2.4 620,672 - fepD b0590 0.26 -2.2 620,728 - fepD b0590 0.32 -2.1 620,749 + fepD b0590 0.34 -3.4 620,749 + fepD b0590 0.34 -1.3 620,749 + fepD b0590 0.34 -1.9 620,780 - fepD b0590 0.37 -0.7 620,808 + fepD b0590 0.40 -3.2 620,808 + fepD b0590 0.40 -2.6 620,892 + fepD b0590 0.48 -1.5 620,900 - fepD b0590 0.49 -1.3 620,964 - fepD b0590 0.55 -2.9 620,964 - fepD b0590 0.55 -2.1 620,970 + fepD b0590 0.56 -2.8 620,970 + fepD b0590 0.56 -1.9 621,018 - fepD b0590 0.61 -3.4 621,228 - fepD b0590 0.82 -3.0 621,295 - fepD b0590 0.88 -2.4 621,295 - fepD b0590 0.88 -2.2 621,331 + -1.9
Or see this region's nucleotide sequence