Strain Fitness in Escherichia coli BW25113 around b3993

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
4,190,791	+	thiS	b4407	0.65	-4.4
4,190,820	+	thiS	b4407	0.80	-0.4
4,190,830	+	thiS	b4407	0.85	-0.1
4,190,860	-				-0.3
4,190,908	-				-0.6
4,190,968	-	thiF	b3992	0.16	-0.7
4,190,968	-	thiF	b3992	0.16	-0.5
4,191,030	+	thiF	b3992	0.25	-0.6
4,191,121	+	thiF	b3992	0.37	-0.4
4,191,121	+	thiF	b3992	0.37	-0.4
4,191,129	-	thiF	b3992	0.38	-0.5
4,191,234	+	thiF	b3992	0.52	-0.4
4,191,236	-	thiF	b3992	0.52	-0.3
4,191,248	+	thiF	b3992	0.53	+0.4
4,191,269	+	thiF	b3992	0.56	-0.8
4,191,282	-	thiF	b3992	0.58	-0.5
4,191,310	-	thiF	b3992	0.62	-0.4
4,191,368	-	thiF	b3992	0.69	-0.6
4,191,376	+	thiF	b3992	0.70	-0.4
4,191,468	-	thiF	b3992	0.83	-0.6
4,191,475	-	thiF	b3992	0.83	-0.4
4,191,475	-	thiF	b3992	0.83	-0.4
4,191,483	-	thiF	b3992	0.85	-1.0
4,191,483	-	thiF	b3992	0.85	-0.0
4,191,489	+	thiF	b3992	0.85	-0.4
4,191,489	+	thiF	b3992	0.85	+0.5
4,191,489	+	thiF	b3992	0.85	-0.7
4,191,489	+	thiF	b3992	0.85	-1.2
4,191,680	+	thiE	b3993	0.14	-0.7
4,191,690	+	thiE	b3993	0.15	-0.8
4,191,731	-	thiE	b3993	0.22	-0.9
4,191,755	+	thiE	b3993	0.26	-0.7
4,191,755	+	thiE	b3993	0.26	-1.1
4,191,859	-	thiE	b3993	0.42	-1.2
4,191,869	-	thiE	b3993	0.44	-0.6
4,191,938	+	thiE	b3993	0.54	-0.6
4,191,983	-	thiE	b3993	0.61	-0.5
4,191,995	-	thiE	b3993	0.63	-0.5
4,191,995	-	thiE	b3993	0.63	-1.0
4,192,021	-	thiE	b3993	0.67	-0.5
4,192,021	-	thiE	b3993	0.67	-0.9
4,192,054	-	thiE	b3993	0.73	-0.6
4,192,054	-	thiE	b3993	0.73	+0.1
4,192,122	-	thiE	b3993	0.83	-1.2
4,192,122	-	thiE	b3993	0.83	-1.1
4,192,151	+	thiE	b3993	0.88	-1.6
4,192,151	+	thiE	b3993	0.88	-1.1
4,192,156	+	thiE	b3993	0.89	-1.2
4,192,158	+	thiE	b3993	0.89	-1.1
4,192,165	+				-1.0
4,192,165	+				+0.4
4,192,167	-				+0.1
4,192,167	-				-0.1
4,192,175	+				-1.0
4,192,175	+				-2.3
4,192,176	-				-0.4
4,192,180	+				-1.0
4,192,183	-				-0.9
4,192,183	-				-1.0
4,192,183	-				-0.9
4,192,410	-				-0.9
4,192,474	+	thiC	b3994	0.13	-1.3
4,192,474	+	thiC	b3994	0.13	-0.3
4,192,547	+	thiC	b3994	0.17	-1.3
4,192,576	-	thiC	b3994	0.18	+0.1
4,192,576	-	thiC	b3994	0.18	+0.3
4,192,606	-	thiC	b3994	0.20	-0.7
4,192,636	+	thiC	b3994	0.22	-0.5
4,192,644	-	thiC	b3994	0.22	-1.5
4,192,644	-	thiC	b3994	0.22	-0.6
4,192,647	-	thiC	b3994	0.22	-0.7
4,192,647	-	thiC	b3994	0.22	-2.0
4,192,652	-	thiC	b3994	0.22	-0.8
4,192,652	-	thiC	b3994	0.22	-0.7
4,192,680	+	thiC	b3994	0.24	-0.7
4,192,687	-	thiC	b3994	0.24	-1.9
4,192,687	-	thiC	b3994	0.24	-0.2
4,192,741	-	thiC	b3994	0.27	-0.3
4,192,749	-	thiC	b3994	0.28	-2.3
4,192,749	-	thiC	b3994	0.28	-0.9
4,192,774	-	thiC	b3994	0.29	-0.3
4,192,774	-	thiC	b3994	0.29	+0.7
4,192,875	-	thiC	b3994	0.34	-0.7
4,192,877	+	thiC	b3994	0.34	-0.9
4,192,884	-	thiC	b3994	0.35	-1.2
4,192,886	-	thiC	b3994	0.35	-0.7
4,192,886	-	thiC	b3994	0.35	-0.8
4,192,940	-	thiC	b3994	0.38	-0.9
4,192,997	+	thiC	b3994	0.41	+0.3
4,192,997	+	thiC	b3994	0.41	-0.9
4,193,000	+	thiC	b3994	0.41	-0.3
4,193,005	-	thiC	b3994	0.41	-0.9
4,193,084	-	thiC	b3994	0.45	-0.2
4,193,106	+	thiC	b3994	0.46	-0.5
4,193,107	-	thiC	b3994	0.46	-0.0
4,193,107	-	thiC	b3994	0.46	-0.6
4,193,138	+	thiC	b3994	0.48	-0.2
4,193,166	-	thiC	b3994	0.50	-0.9
4,193,168	-	thiC	b3994	0.50	-0.8
4,193,168	-	thiC	b3994	0.50	-0.5