Strain Fitness in Escherichia coli BW25113 around b3911

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
4,100,717	-				+0.5
4,100,717	-				-0.6
4,100,725	-				-1.4
4,100,755	+				+0.3
4,100,842	-				-1.9
4,100,842	-				+0.1
4,100,862	+				+0.5
4,100,862	+				-0.1
4,100,863	-				+0.4
4,100,863	-				-0.6
4,100,868	-				+0.2
4,100,868	-				-0.1
4,100,870	-				-0.2
4,100,873	-				+0.1
4,100,877	+				+0.0
4,100,927	-	yiiM	b3910	0.12	+0.6
4,100,927	-	yiiM	b3910	0.12	+1.6
4,100,953	-	yiiM	b3910	0.16	-0.3
4,100,997	-	yiiM	b3910	0.23	+0.6
4,100,998	+	yiiM	b3910	0.23	-0.2
4,101,017	+	yiiM	b3910	0.25	+0.1
4,101,047	-	yiiM	b3910	0.30	-0.4
4,101,059	+	yiiM	b3910	0.32	+0.5
4,101,169	-	yiiM	b3910	0.48	+0.1
4,101,276	+	yiiM	b3910	0.64	-0.5
4,101,276	+	yiiM	b3910	0.64	-0.1
4,101,276	+	yiiM	b3910	0.64	+0.6
4,101,306	-	yiiM	b3910	0.68	+0.9
4,101,306	-	yiiM	b3910	0.68	+0.2
4,101,324	+	yiiM	b3910	0.71	-0.7
4,101,327	-	yiiM	b3910	0.71	+0.6
4,101,345	+	yiiM	b3910	0.74	+0.4
4,101,345	+	yiiM	b3910	0.74	-0.0
4,101,355	+	yiiM	b3910	0.76	+0.1
4,101,355	+	yiiM	b3910	0.76	-0.2
4,101,363	-	yiiM	b3910	0.77	-0.2
4,101,372	-	yiiM	b3910	0.78	-0.5
4,101,372	-	yiiM	b3910	0.78	-1.3
4,101,373	+	yiiM	b3910	0.78	+0.2
4,101,381	+	yiiM	b3910	0.79	+0.1
4,101,528	+				-0.9
4,101,528	+				+0.1
4,101,528	+				-0.4
4,101,534	-				-0.2
4,101,536	-				+0.5
4,101,566	-				-0.2
4,101,640	-				-0.1
4,101,640	-				-0.4
4,101,645	-				+0.8
4,101,660	+				-1.1
4,101,697	-				-1.9
4,101,698	-				-0.6
4,101,708	-				-2.3
4,101,739	+				-1.0
4,101,774	+	cpxA	b3911	0.11	-0.6
4,101,787	+	cpxA	b3911	0.12	-0.7
4,101,793	-	cpxA	b3911	0.12	-0.8
4,101,793	-	cpxA	b3911	0.12	-1.5
4,101,828	+	cpxA	b3911	0.15	-0.1
4,101,836	-	cpxA	b3911	0.15	-2.2
4,101,883	+	cpxA	b3911	0.19	-0.8
4,101,895	-	cpxA	b3911	0.20	-1.4
4,101,913	-	cpxA	b3911	0.21	-2.3
4,101,981	+	cpxA	b3911	0.26	-0.1
4,102,001	-	cpxA	b3911	0.27	-1.3
4,102,001	-	cpxA	b3911	0.27	-1.9
4,102,009	-	cpxA	b3911	0.28	-1.1
4,102,009	-	cpxA	b3911	0.28	-1.6
4,102,033	-	cpxA	b3911	0.30	-1.4
4,102,042	+	cpxA	b3911	0.30	-0.8
4,102,042	+	cpxA	b3911	0.30	-0.0
4,102,042	+	cpxA	b3911	0.30	+0.0
4,102,047	+	cpxA	b3911	0.31	-0.5
4,102,047	+	cpxA	b3911	0.31	-1.0
4,102,055	+	cpxA	b3911	0.31	-1.1
4,102,079	-	cpxA	b3911	0.33	-2.5
4,102,079	-	cpxA	b3911	0.33	-1.7
4,102,090	-				+0.6
4,102,134	+	cpxA	b3911	0.37	-0.1
4,102,152	-	cpxA	b3911	0.38	-1.8
4,102,152	-	cpxA	b3911	0.38	-2.8
4,102,152	-	cpxA	b3911	0.38	-3.4
4,102,182	-	cpxA	b3911	0.41	-1.5
4,102,182	-	cpxA	b3911	0.41	-1.5
4,102,236	+	cpxA	b3911	0.44	+0.1
4,102,242	-	cpxA	b3911	0.45	-2.5
4,102,242	-	cpxA	b3911	0.45	-3.7
4,102,251	+	cpxA	b3911	0.46	-0.4
4,102,299	+	cpxA	b3911	0.49	-0.3
4,102,299	+	cpxA	b3911	0.49	+0.0
4,102,308	-	cpxA	b3911	0.50	-2.1
4,102,444	+	cpxA	b3911	0.60	-0.5
4,102,453	-	cpxA	b3911	0.60	+0.9
4,102,453	-	cpxA	b3911	0.60	+0.3
4,102,453	-	cpxA	b3911	0.60	+0.3
4,102,453	-	cpxA	b3911	0.60	+0.9
4,102,461	+	cpxA	b3911	0.61	+0.0
4,102,461	+	cpxA	b3911	0.61	+0.8
4,102,475	-	cpxA	b3911	0.62	-1.7
4,102,475	-	cpxA	b3911	0.62	-1.5
4,102,477	+	cpxA	b3911	0.62	+0.8
4,102,521	-	cpxA	b3911	0.65	-1.5
4,102,612	+	cpxA	b3911	0.72	+0.3
4,102,620	-	cpxA	b3911	0.72	-1.5
4,102,712	-	cpxA	b3911	0.79	-2.5
4,102,712	-	cpxA	b3911	0.79	-1.8
4,102,725	+	cpxA	b3911	0.80	+0.2
4,102,776	-	cpxA	b3911	0.84	-3.5
4,102,776	-	cpxA	b3911	0.84	-2.2
4,102,800	+	cpxA	b3911	0.86	+0.9
4,102,800	+	cpxA	b3911	0.86	+0.1
4,102,800	-	cpxA	b3911	0.86	-1.7
4,102,800	-	cpxA	b3911	0.86	-0.4
4,102,800	-	cpxA	b3911	0.86	-1.2
4,102,800	-	cpxA	b3911	0.86	-3.6
4,102,831	-	cpxA	b3911	0.88	-2.4
4,102,846	+	cpxA	b3911	0.89	+0.1
4,102,846	-	cpxA	b3911	0.89	-1.7
4,102,846	-	cpxA	b3911	0.89	-1.1
4,102,856	-	cpxA	b3911	0.90	-0.9
4,102,856	-	cpxA	b3911	0.90	-1.4
4,102,910	+				-0.4
4,102,941	-				-0.7
4,102,958	-				-0.7
4,102,988	-				-2.2
4,102,988	-				-1.2
4,103,043	-				-0.4
4,103,084	+	cpxR	b3912	0.13	-1.0
4,103,084	+	cpxR	b3912	0.13	-0.5
4,103,148	-	cpxR	b3912	0.22	-0.9
4,103,207	-	cpxR	b3912	0.30	-1.2
4,103,207	-	cpxR	b3912	0.30	-1.8
4,103,210	+	cpxR	b3912	0.31	-1.1
4,103,213	-	cpxR	b3912	0.31	-0.5
4,103,226	+	cpxR	b3912	0.33	-0.2
4,103,226	+	cpxR	b3912	0.33	-0.2
4,103,273	+	cpxR	b3912	0.40	-1.5
4,103,273	+	cpxR	b3912	0.40	-1.0
4,103,274	-	cpxR	b3912	0.40	-0.6
4,103,307	-	cpxR	b3912	0.45	-0.7
4,103,340	-	cpxR	b3912	0.49	-1.0
4,103,354	-	cpxR	b3912	0.51	-0.6
4,103,354	-	cpxR	b3912	0.51	-0.1
4,103,354	-	cpxR	b3912	0.51	-2.4
4,103,365	+	cpxR	b3912	0.53	+0.2
4,103,401	-	cpxR	b3912	0.58	-2.3
4,103,401	-	cpxR	b3912	0.58	-1.5
4,103,406	-	cpxR	b3912	0.59	+1.6
4,103,420	+	cpxR	b3912	0.61	-0.6
4,103,428	-	cpxR	b3912	0.62	-0.2
4,103,428	-	cpxR	b3912	0.62	-0.5
4,103,444	+	cpxR	b3912	0.64	+0.0
4,103,452	-	cpxR	b3912	0.65	-1.4
4,103,468	+	cpxR	b3912	0.68	-1.8
4,103,468	+	cpxR	b3912	0.68	-1.9
4,103,478	+	cpxR	b3912	0.69	-0.2
4,103,496	-	cpxR	b3912	0.72	-1.9
4,103,496	-	cpxR	b3912	0.72	-1.0
4,103,496	-	cpxR	b3912	0.72	-0.5
4,103,585	+	cpxR	b3912	0.84	-1.0
4,103,585	+	cpxR	b3912	0.84	+0.8
4,103,598	+	cpxR	b3912	0.86	+0.4
4,103,620	-	cpxR	b3912	0.89	-2.0
4,103,639	+				-0.8
4,103,676	-				-0.2
4,103,676	-				-0.0
4,103,695	-				+0.3
4,103,757	+				-0.1
4,103,858	-				-0.4
4,103,860	-				+0.5
4,103,864	+				+0.4
4,103,879	-				+1.2
4,103,879	-				+0.8
4,103,906	+	cpxP	b4484	0.13	-0.7
4,103,953	+	cpxP	b4484	0.22	+0.6
4,103,958	+	cpxP	b4484	0.23	-0.1
4,103,958	+	cpxP	b4484	0.23	-0.2
4,103,959	-	cpxP	b4484	0.23	+0.6
4,103,964	-	cpxP	b4484	0.24	+0.3
4,103,971	-	cpxP	b4484	0.26	+0.7
4,103,989	+	cpxP	b4484	0.29	-0.1
4,103,989	+	cpxP	b4484	0.29	+0.5
4,103,997	-	cpxP	b4484	0.31	+1.1