Strain Fitness in Escherichia coli BW25113 around b1646
Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr |
|---|---|---|---|---|---|
| remove | |||||
| 1,721,170 | - | ydhK | b1645 | 0.51 | +0.4 |
| 1,721,197 | + | ydhK | b1645 | 0.52 | +0.8 |
| 1,721,225 | - | ydhK | b1645 | 0.54 | +0.2 |
| 1,721,225 | - | ydhK | b1645 | 0.54 | -0.1 |
| 1,721,272 | + | ydhK | b1645 | 0.56 | -0.8 |
| 1,721,272 | + | ydhK | b1645 | 0.56 | -0.7 |
| 1,721,272 | + | ydhK | b1645 | 0.56 | +0.1 |
| 1,721,338 | + | ydhK | b1645 | 0.59 | +0.1 |
| 1,721,343 | - | ydhK | b1645 | 0.60 | -0.2 |
| 1,721,676 | + | ydhK | b1645 | 0.76 | -0.0 |
| 1,721,722 | + | ydhK | b1645 | 0.78 | +0.5 |
| 1,721,722 | + | ydhK | b1645 | 0.78 | -0.0 |
| 1,721,762 | - | ydhK | b1645 | 0.80 | -0.3 |
| 1,721,805 | - | ydhK | b1645 | 0.82 | -0.1 |
| 1,721,805 | - | ydhK | b1645 | 0.82 | -0.1 |
| 1,721,877 | - | ydhK | b1645 | 0.86 | -0.4 |
| 1,721,877 | - | ydhK | b1645 | 0.86 | -0.3 |
| 1,721,941 | + | ydhK | b1645 | 0.89 | -0.2 |
| 1,722,103 | - | -0.0 | |||
| 1,722,176 | + | -0.7 | |||
| 1,722,692 | - | +0.1 | |||
| 1,722,692 | - | -1.1 | |||
| 1,722,868 | - | ydhF | b1647 | 0.12 | +0.3 |
| 1,722,868 | - | ydhF | b1647 | 0.12 | +0.4 |
| 1,722,904 | - | ydhF | b1647 | 0.16 | -0.1 |
| 1,722,904 | - | ydhF | b1647 | 0.16 | -0.0 |
| 1,723,132 | + | ydhF | b1647 | 0.41 | +0.3 |
| 1,723,138 | - | ydhF | b1647 | 0.42 | +0.8 |
| 1,723,490 | + | ydhF | b1647 | 0.81 | -0.1 |
Or see this region's nucleotide sequence