Strain Fitness in Escherichia coli BW25113 around b0945

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
1,003,071	-	b0943	b0943	0.79	-0.7
1,003,071	-	b0943	b0943	0.79	+0.6
1,003,072	-	b0943	b0943	0.79	+1.7
1,003,109	+	b0943	b0943	0.87	+0.3
1,003,112	+	b0943	b0943	0.87	+0.1
1,003,338	+	ycbF	b0944	0.24	+0.1
1,003,385	+	ycbF	b0944	0.30	+0.4
1,003,393	-	ycbF	b0944	0.31	+0.6
1,003,460	-	ycbF	b0944	0.41	-1.0
1,003,616	+	ycbF	b0944	0.63	+0.5
1,003,627	+	ycbF	b0944	0.64	-0.3
1,003,688	-	ycbF	b0944	0.73	+0.1
1,003,705	-	ycbF	b0944	0.75	+0.1
1,003,705	-	ycbF	b0944	0.75	+0.2
1,003,723	+	ycbF	b0944	0.78	+0.6
1,003,723	+	ycbF	b0944	0.78	+0.2
1,003,775	+	ycbF	b0944	0.85	-0.2
1,003,775	+	ycbF	b0944	0.85	+0.2
1,003,959	-				+0.2
1,004,039	-				-1.6
1,004,050	-				-1.4
1,004,119	+	pyrD	b0945	0.13	-2.3
1,004,126	+	pyrD	b0945	0.13	+0.1
1,004,126	+	pyrD	b0945	0.13	-0.4
1,004,126	+	pyrD	b0945	0.13	-1.2
1,004,134	+	pyrD	b0945	0.14	-1.2
1,004,141	+	pyrD	b0945	0.15	-0.1
1,004,174	-	pyrD	b0945	0.18	-0.4
1,004,234	+	pyrD	b0945	0.24	-1.7
1,004,239	+	pyrD	b0945	0.25	-0.9
1,004,256	-	pyrD	b0945	0.26	-0.4
1,004,256	-	pyrD	b0945	0.26	-1.4
1,004,277	-	pyrD	b0945	0.28	+0.1
1,004,307	-	pyrD	b0945	0.31	-0.4
1,004,350	+	pyrD	b0945	0.36	-0.4
1,004,403	-	pyrD	b0945	0.41	+1.1
1,004,440	+	pyrD	b0945	0.44	-1.9
1,004,513	+	pyrD	b0945	0.52	-0.9
1,004,513	+	pyrD	b0945	0.52	+1.1
1,004,523	+	pyrD	b0945	0.53	-1.4
1,004,531	-	pyrD	b0945	0.53	+1.1
1,004,545	-	pyrD	b0945	0.55	-0.9
1,004,553	-	pyrD	b0945	0.56	+1.1
1,004,568	+	pyrD	b0945	0.57	-0.4
1,004,568	+	pyrD	b0945	0.57	-0.4
1,004,614	+	pyrD	b0945	0.62	-0.9
1,004,636	+	pyrD	b0945	0.64	-0.9
1,004,689	-	pyrD	b0945	0.69	+0.1
1,004,698	+	pyrD	b0945	0.70	-1.9
1,004,698	+	pyrD	b0945	0.70	-0.4
1,004,708	-	pyrD	b0945	0.71	+0.1
1,004,717	+	pyrD	b0945	0.72	-1.7
1,004,720	-	pyrD	b0945	0.72	+0.6
1,004,722	+	pyrD	b0945	0.72	-2.2
1,004,727	+	pyrD	b0945	0.73	+1.1
1,004,727	+	pyrD	b0945	0.73	-0.4
1,004,733	-	pyrD	b0945	0.73	+1.1
1,004,733	-	pyrD	b0945	0.73	+1.1
1,004,736	-	pyrD	b0945	0.74	-0.9
1,004,780	-	pyrD	b0945	0.78	+1.1
1,004,783	+	pyrD	b0945	0.78	-1.8
1,004,785	+	pyrD	b0945	0.79	+0.1
1,004,791	-	pyrD	b0945	0.79	+1.1
1,004,791	-	pyrD	b0945	0.79	-0.9
1,004,801	-	pyrD	b0945	0.80	+1.1
1,004,871	+	pyrD	b0945	0.87	-0.4
1,004,871	+	pyrD	b0945	0.87	+1.1
1,004,871	+	pyrD	b0945	0.87	-0.4
1,004,888	-	pyrD	b0945	0.89	+1.1
1,004,938	+				-1.2
1,004,938	+				-1.9
1,005,020	-				+0.1
1,005,067	-				-0.2
1,005,108	-				-0.1
1,005,124	+				-0.5
1,005,137	-				-0.1
1,005,150	+				-0.7
1,005,152	+				+0.3
1,005,160	+				+0.1
1,005,166	-				-0.1
1,005,166	-				+0.0
1,005,168	-				-0.1
1,005,168	-				+0.1
1,005,170	-				+0.5
1,005,215	-				+0.1
1,005,227	+				+0.6
1,005,228	-				-0.3
1,005,228	-				+0.3
1,005,261	-	ycbW	b0946	0.16	-0.6
1,005,331	-	ycbW	b0946	0.29	+1.6
1,005,405	+	ycbW	b0946	0.42	+0.1
1,005,408	+	ycbW	b0946	0.43	+1.1
1,005,408	+	ycbW	b0946	0.43	+0.1
1,005,413	-	ycbW	b0946	0.44	+0.1
1,005,413	-	ycbW	b0946	0.44	-0.2
1,005,414	-	ycbW	b0946	0.44	-0.6
1,005,414	-	ycbW	b0946	0.44	+0.0
1,005,425	-	ycbW	b0946	0.46	-0.5
1,005,515	+	ycbW	b0946	0.63	-0.1
1,005,522	+	ycbW	b0946	0.64	-0.0
1,005,628	+	ycbW	b0946	0.83	-0.4
1,005,712	+				+0.0
1,005,720	-				-0.3
1,005,973	-	ycbX	b0947	0.23	-0.3
1,005,981	-	ycbX	b0947	0.24	-0.4