Strain Fitness in Escherichia coli BW25113 around b4005

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
4,201,685	-	zraR	b4004	0.26	+0.0
4,201,707	+	zraR	b4004	0.27	-0.0
4,201,717	+	zraR	b4004	0.28	-0.3
4,201,719	+	zraR	b4004	0.28	+0.5
4,201,722	-	zraR	b4004	0.29	-0.2
4,201,722	-	zraR	b4004	0.29	+0.2
4,201,727	-	zraR	b4004	0.29	-1.5
4,201,727	-	zraR	b4004	0.29	+0.1
4,201,727	-	zraR	b4004	0.29	+0.5
4,201,746	+	zraR	b4004	0.30	+0.2
4,201,756	+	zraR	b4004	0.31	+0.2
4,201,789	-	zraR	b4004	0.34	+0.1
4,201,798	+	zraR	b4004	0.34	-0.2
4,201,798	+	zraR	b4004	0.34	+0.3
4,201,841	+	zraR	b4004	0.38	-0.0
4,201,873	+	zraR	b4004	0.40	+0.0
4,201,932	+	zraR	b4004	0.44	-0.2
4,201,935	-	zraR	b4004	0.45	+1.1
4,201,935	-	zraR	b4004	0.45	-0.5
4,201,945	+	zraR	b4004	0.45	-0.7
4,202,109	+	zraR	b4004	0.58	-0.9
4,202,111	+	zraR	b4004	0.58	+0.5
4,202,195	-	zraR	b4004	0.64	-0.4
4,202,199	+	zraR	b4004	0.65	+0.3
4,202,214	-	zraR	b4004	0.66	-0.0
4,202,239	-	zraR	b4004	0.68	+0.4
4,202,239	-	zraR	b4004	0.68	+0.7
4,202,420	-	zraR	b4004	0.81	-0.5
4,202,420	-	zraR	b4004	0.81	-0.0
4,202,631	-				-0.0
4,202,758	+				-2.0
4,202,777	-				-4.2
4,202,783	-				-4.0
4,202,785	-				-3.0
4,202,785	-				-3.3
4,202,800	+	purD	b4005	0.10	-3.3
4,202,852	-	purD	b4005	0.14	-2.7
4,202,865	+	purD	b4005	0.16	-3.1
4,202,904	+	purD	b4005	0.19	-1.8
4,202,904	+	purD	b4005	0.19	-2.8
4,202,905	-	purD	b4005	0.19	-4.6
4,202,905	-	purD	b4005	0.19	-2.7
4,202,993	-	purD	b4005	0.25	-2.3
4,203,007	+	purD	b4005	0.27	-4.5
4,203,030	+	purD	b4005	0.28	-5.0
4,203,128	+	purD	b4005	0.36	-4.1
4,203,128	+	purD	b4005	0.36	-3.6
4,203,130	+	purD	b4005	0.36	-2.0
4,203,143	-	purD	b4005	0.37	-5.5
4,203,159	+	purD	b4005	0.38	-3.8
4,203,235	+	purD	b4005	0.44	-2.8
4,203,243	-	purD	b4005	0.45	-2.9
4,203,360	+	purD	b4005	0.54	-3.2
4,203,385	+	purD	b4005	0.56	-4.0
4,203,428	+	purD	b4005	0.59	-4.0
4,203,445	+	purD	b4005	0.60	-3.2
4,203,445	+	purD	b4005	0.60	-3.4
4,203,491	-	purD	b4005	0.64	-2.9
4,203,491	-	purD	b4005	0.64	-4.1
4,203,496	+	purD	b4005	0.64	-5.6
4,203,505	+	purD	b4005	0.65	-2.6
4,203,550	-	purD	b4005	0.69	-3.1
4,203,657	-	purD	b4005	0.77	-2.5
4,203,657	-	purD	b4005	0.77	-3.4
4,203,673	-	purD	b4005	0.78	-3.0
4,203,673	-	purD	b4005	0.78	-2.7
4,203,719	+	purD	b4005	0.82	-3.2
4,203,838	-				-3.4
4,203,853	-				-3.6
4,203,853	-				-4.5
4,204,001	+				-3.2
4,204,001	+				-2.6
4,204,105	-				-2.8
4,204,154	-	purH	b4006	0.12	-2.0
4,204,200	+	purH	b4006	0.15	-3.6
4,204,212	+	purH	b4006	0.15	-3.7
4,204,231	-	purH	b4006	0.17	-3.2
4,204,257	+	purH	b4006	0.18	-3.8
4,204,297	-	purH	b4006	0.21	-3.1
4,204,297	-	purH	b4006	0.21	-2.0
4,204,358	+	purH	b4006	0.25	-4.1
4,204,386	+	purH	b4006	0.26	-3.5
4,204,386	+	purH	b4006	0.26	-3.0
4,204,394	-	purH	b4006	0.27	-2.0
4,204,394	-	purH	b4006	0.27	-2.3
4,204,394	-	purH	b4006	0.27	-2.5
4,204,394	-	purH	b4006	0.27	-3.1
4,204,407	+	purH	b4006	0.28	-3.5
4,204,413	-	purH	b4006	0.28	-3.9
4,204,433	+	purH	b4006	0.29	-3.8
4,204,527	+	purH	b4006	0.35	-3.6
4,204,527	+	purH	b4006	0.35	-2.3
4,204,528	-	purH	b4006	0.35	-3.0
4,204,528	-	purH	b4006	0.35	-1.6
4,204,567	-	purH	b4006	0.38	-3.7
4,204,567	-	purH	b4006	0.38	-3.3
4,204,737	+	purH	b4006	0.48	-2.5
4,204,759	+	purH	b4006	0.50	-3.0
4,204,766	+	purH	b4006	0.50	-3.2
4,204,793	-	purH	b4006	0.52	-4.3
4,204,837	+	purH	b4006	0.55	-3.5
4,204,837	+	purH	b4006	0.55	-3.7
4,204,837	+	purH	b4006	0.55	-6.5
4,204,840	-	purH	b4006	0.55	-6.0
4,204,840	-	purH	b4006	0.55	-3.6
4,204,845	-	purH	b4006	0.55	-3.7
4,204,851	+	purH	b4006	0.56	-1.6
4,204,889	+	purH	b4006	0.58	-3.3
4,204,921	-	purH	b4006	0.60	-2.6