Strain Fitness in Escherichia coli BW25113 around b3828

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
4,008,903	-	yigL	b3826	0.85	+0.5
4,008,910	+	yigL	b3826	0.86	+0.0
4,008,918	-	yigL	b3826	0.87	-0.3
4,008,920	+	yigL	b3826	0.87	-0.1
4,008,920	+	yigL	b3826	0.87	-0.1
4,008,920	+	yigL	b3826	0.87	-0.4
4,008,968	+				-0.0
4,009,067	-				-0.1
4,009,082	-				+0.1
4,009,134	-				+0.1
4,009,176	-				+0.3
4,009,176	-				+0.1
4,009,205	-	yigM	b3827	0.12	+0.4
4,009,275	+	yigM	b3827	0.20	+0.5
4,009,275	+	yigM	b3827	0.20	-0.4
4,009,275	+	yigM	b3827	0.20	-0.2
4,009,275	+	yigM	b3827	0.20	-0.4
4,009,275	+	yigM	b3827	0.20	-0.0
4,009,275	+	yigM	b3827	0.20	-0.8
4,009,283	-	yigM	b3827	0.20	-0.3
4,009,283	-	yigM	b3827	0.20	+0.2
4,009,311	-	yigM	b3827	0.24	+0.2
4,009,334	+	yigM	b3827	0.26	-0.8
4,009,334	+	yigM	b3827	0.26	-0.4
4,009,338	-	yigM	b3827	0.27	-0.1
4,009,348	-	yigM	b3827	0.28	+0.9
4,009,348	-	yigM	b3827	0.28	-0.1
4,009,406	-	yigM	b3827	0.34	+0.1
4,009,428	+	yigM	b3827	0.37	-0.3
4,009,434	+	yigM	b3827	0.37	-0.5
4,009,434	+	yigM	b3827	0.37	+0.4
4,009,451	-	yigM	b3827	0.39	-0.3
4,009,495	-	yigM	b3827	0.44	+0.5
4,009,495	-	yigM	b3827	0.44	-0.1
4,009,506	+	yigM	b3827	0.45	+0.2
4,009,524	-	yigM	b3827	0.47	+0.0
4,009,600	+	yigM	b3827	0.56	-0.6
4,009,772	+	yigM	b3827	0.75	-1.0
4,009,839	-	yigM	b3827	0.82	-0.0
4,009,839	-	yigM	b3827	0.82	+0.4
4,009,845	-	yigM	b3827	0.83	+0.7
4,009,845	-	yigM	b3827	0.83	-0.2
4,009,874	+	yigM	b3827	0.86	-0.4
4,009,904	+				-2.7
4,009,917	-				-0.1
4,009,921	-				-1.5
4,009,921	-				-3.4
4,009,947	-				+0.2
4,010,026	-	metR	b3828	0.15	-3.4
4,010,026	-	metR	b3828	0.15	-3.8
4,010,038	-	metR	b3828	0.16	-3.4
4,010,048	-	metR	b3828	0.17	-3.8
4,010,094	-	metR	b3828	0.22	-2.3
4,010,094	-	metR	b3828	0.22	-3.7
4,010,094	-	metR	b3828	0.22	-5.3
4,010,100	-	metR	b3828	0.22	-3.7
4,010,113	+	metR	b3828	0.24	-4.3
4,010,152	-	metR	b3828	0.28	-3.1
4,010,245	+	metR	b3828	0.38	-4.1
4,010,247	+	metR	b3828	0.38	-2.6
4,010,267	+	metR	b3828	0.40	-2.7
4,010,267	+	metR	b3828	0.40	-3.5
4,010,337	-	metR	b3828	0.47	-1.8
4,010,353	+	metR	b3828	0.49	-2.6
4,010,386	-	metR	b3828	0.52	-4.9
4,010,386	-	metR	b3828	0.52	-3.3
4,010,386	-	metR	b3828	0.52	-3.8
4,010,461	-	metR	b3828	0.60	-3.9
4,010,461	-	metR	b3828	0.60	-3.6
4,010,541	+	metR	b3828	0.69	-1.5
4,010,541	+	metR	b3828	0.69	-3.4
4,010,546	-	metR	b3828	0.69	-4.5
4,010,549	-	metR	b3828	0.69	-1.3
4,010,560	-	metR	b3828	0.71	-3.4
4,010,560	-	metR	b3828	0.71	-3.2
4,010,572	-	metR	b3828	0.72	-3.7
4,010,572	-	metR	b3828	0.72	-3.9
4,010,677	-	metR	b3828	0.83	-2.3
4,010,729	+	metR	b3828	0.88	-3.0
4,010,969	+				-3.6
4,010,977	-				-3.6
4,011,206	+				-3.4
4,011,244	+				-1.2
4,011,244	+				-0.6
4,011,246	-				-4.2
4,011,246	-				-3.8
4,011,273	+				-2.0
4,011,273	+				-3.3
4,011,278	+				-3.3
4,011,279	-				-3.2
4,011,281	-				-3.9
4,011,286	-				-3.8
4,011,286	-				-2.1
4,011,286	-				-3.9
4,011,286	-				-1.8
4,011,303	+	metE	b3829	0.10	-2.6
4,011,304	-	metE	b3829	0.10	-2.6
4,011,306	+	metE	b3829	0.10	-4.6
4,011,306	+	metE	b3829	0.10	-3.2
4,011,316	-	metE	b3829	0.11	-3.6
4,011,316	-	metE	b3829	0.11	-1.5
4,011,324	-	metE	b3829	0.11	-3.1
4,011,359	-	metE	b3829	0.13	-4.8
4,011,376	-	metE	b3829	0.13	-4.3
4,011,434	+	metE	b3829	0.16	-2.7
4,011,450	-	metE	b3829	0.17	-0.1
4,011,453	-	metE	b3829	0.17	-3.5
4,011,462	-	metE	b3829	0.17	-3.6
4,011,489	+	metE	b3829	0.18	-3.6
4,011,489	+	metE	b3829	0.18	-3.1
4,011,497	-	metE	b3829	0.19	-3.1
4,011,532	-	metE	b3829	0.20	-4.3
4,011,566	-	metE	b3829	0.22	-4.1
4,011,591	+	metE	b3829	0.23	-5.4
4,011,614	+	metE	b3829	0.24	-2.9
4,011,614	+	metE	b3829	0.24	-3.9
4,011,689	+	metE	b3829	0.27	-3.4
4,011,703	-	metE	b3829	0.28	-4.0
4,011,703	-	metE	b3829	0.28	-4.2
4,011,740	-	metE	b3829	0.29	-3.4
4,011,769	+	metE	b3829	0.31	-3.9
4,011,769	+	metE	b3829	0.31	-3.1
4,011,778	-	metE	b3829	0.31	-1.8