Strain Fitness in Escherichia coli BW25113 around b1613
Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr |
---|---|---|---|---|---|
remove | |||||
1,685,895 | - | fumA | b1612 | 0.69 | -0.0 |
1,685,895 | - | fumA | b1612 | 0.69 | +0.7 |
1,686,443 | + | +0.1 | |||
1,686,629 | - | +0.5 | |||
1,686,693 | + | -0.1 | |||
1,686,718 | - | manA | b1613 | 0.10 | -0.2 |
1,686,749 | - | manA | b1613 | 0.13 | +0.8 |
1,686,749 | - | manA | b1613 | 0.13 | -0.6 |
1,686,883 | - | manA | b1613 | 0.24 | -1.2 |
1,687,299 | + | manA | b1613 | 0.59 | -0.8 |
1,687,351 | + | manA | b1613 | 0.64 | -2.1 |
1,687,526 | - | manA | b1613 | 0.79 | +0.0 |
1,687,932 | - | +0.1 | |||
1,688,065 | + | ydgA | b1614 | 0.13 | -0.7 |
1,688,226 | + | ydgA | b1614 | 0.23 | -0.7 |
1,688,573 | - | ydgA | b1614 | 0.46 | +0.8 |
1,688,718 | - | ydgA | b1614 | 0.56 | +0.8 |
Or see this region's nucleotide sequence