Strain Fitness in Escherichia coli BW25113 around b0741
Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr |
---|---|---|---|---|---|
remove | |||||
777,299 | - | tolB | b0740 | 0.26 | -0.0 |
777,303 | - | tolB | b0740 | 0.26 | +1.0 |
777,393 | - | tolB | b0740 | 0.33 | +1.0 |
777,398 | - | tolB | b0740 | 0.34 | +1.0 |
777,444 | - | tolB | b0740 | 0.37 | +1.0 |
777,513 | + | tolB | b0740 | 0.43 | +1.0 |
777,522 | - | tolB | b0740 | 0.43 | +1.0 |
777,602 | - | tolB | b0740 | 0.49 | +1.0 |
777,602 | - | tolB | b0740 | 0.49 | +1.0 |
777,692 | + | tolB | b0740 | 0.56 | -0.0 |
777,700 | - | tolB | b0740 | 0.57 | +1.0 |
777,720 | - | tolB | b0740 | 0.59 | +1.0 |
777,770 | - | tolB | b0740 | 0.62 | +1.0 |
777,792 | - | tolB | b0740 | 0.64 | +1.0 |
777,839 | - | tolB | b0740 | 0.68 | +1.0 |
777,952 | - | tolB | b0740 | 0.76 | +1.0 |
777,954 | - | tolB | b0740 | 0.77 | +1.0 |
777,987 | - | tolB | b0740 | 0.79 | +1.0 |
778,009 | - | tolB | b0740 | 0.81 | +1.0 |
778,014 | - | tolB | b0740 | 0.81 | +1.0 |
778,020 | - | tolB | b0740 | 0.82 | +1.0 |
778,070 | + | tolB | b0740 | 0.86 | +1.0 |
778,127 | - | +1.0 | |||
778,150 | - | +1.0 | |||
778,150 | - | +1.0 | |||
778,212 | + | +1.0 | |||
778,212 | + | +1.0 | |||
778,212 | + | +1.0 | |||
778,220 | - | +1.0 | |||
778,222 | + | -0.0 | |||
778,316 | + | +1.0 | |||
778,316 | + | -0.6 | |||
778,382 | + | pal | b0741 | 0.18 | +1.0 |
778,395 | - | pal | b0741 | 0.20 | -0.0 |
778,420 | - | pal | b0741 | 0.25 | +1.0 |
778,422 | - | pal | b0741 | 0.25 | -0.6 |
778,455 | + | pal | b0741 | 0.32 | +1.0 |
778,455 | + | pal | b0741 | 0.32 | -0.0 |
778,560 | + | pal | b0741 | 0.52 | -0.0 |
778,568 | - | pal | b0741 | 0.53 | -0.0 |
778,596 | - | pal | b0741 | 0.59 | +1.0 |
778,600 | + | pal | b0741 | 0.59 | -0.0 |
778,604 | - | pal | b0741 | 0.60 | +1.0 |
778,656 | - | pal | b0741 | 0.70 | +1.0 |
778,656 | - | +1.0 | |||
778,661 | - | pal | b0741 | 0.71 | -0.0 |
778,713 | - | pal | b0741 | 0.81 | +1.0 |
778,752 | + | pal | b0741 | 0.89 | -2.8 |
778,752 | + | pal | b0741 | 0.89 | -0.6 |
778,752 | + | pal | b0741 | 0.89 | -2.0 |
778,780 | + | -1.8 | |||
778,780 | + | -1.0 | |||
778,805 | - | -2.1 | |||
778,851 | + | +0.1 | |||
778,856 | + | -1.1 | |||
778,864 | - | -0.0 | |||
778,870 | + | -0.0 | |||
778,932 | + | ybgF | b0742 | 0.14 | -0.8 |
778,940 | - | ybgF | b0742 | 0.15 | -0.2 |
778,940 | - | ybgF | b0742 | 0.15 | +0.2 |
778,940 | - | ybgF | b0742 | 0.15 | -1.0 |
778,940 | - | ybgF | b0742 | 0.15 | -1.9 |
779,036 | + | ybgF | b0742 | 0.27 | -0.4 |
779,145 | + | ybgF | b0742 | 0.41 | -0.1 |
779,145 | + | ybgF | b0742 | 0.41 | -0.5 |
779,158 | - | ybgF | b0742 | 0.43 | -0.3 |
779,196 | + | ybgF | b0742 | 0.47 | -0.7 |
779,201 | + | ybgF | b0742 | 0.48 | +0.2 |
779,201 | + | ybgF | b0742 | 0.48 | +0.5 |
779,204 | - | ybgF | b0742 | 0.48 | +0.3 |
779,263 | - | ybgF | b0742 | 0.56 | -0.4 |
779,263 | - | ybgF | b0742 | 0.56 | -0.3 |
779,269 | + | ybgF | b0742 | 0.57 | -0.0 |
779,342 | + | ybgF | b0742 | 0.66 | +0.2 |
779,342 | + | ybgF | b0742 | 0.66 | -0.2 |
779,392 | - | ybgF | b0742 | 0.72 | -0.3 |
779,428 | - | ybgF | b0742 | 0.77 | -0.3 |
779,510 | + | ybgF | b0742 | 0.87 | -1.4 |
779,544 | - | -0.3 | |||
779,544 | - | -0.6 | |||
779,565 | + | -0.4 | |||
779,610 | - | -0.6 | |||
779,619 | + | -0.4 |
Or see this region's nucleotide sequence