Strain Fitness in Escherichia coli BW25113 around b0683
Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr |
---|---|---|---|---|---|
remove | |||||
708,760 | - | ybfM | b0681 | 0.86 | -1.0 |
708,764 | + | ybfM | b0681 | 0.86 | -0.2 |
708,766 | + | ybfM | b0681 | 0.86 | -0.7 |
708,766 | + | ybfM | b0681 | 0.86 | -0.2 |
708,785 | + | ybfM | b0681 | 0.87 | -0.3 |
708,785 | + | ybfM | b0681 | 0.87 | +0.4 |
708,800 | + | ybfM | b0681 | 0.88 | +0.0 |
708,803 | + | ybfM | b0681 | 0.89 | +0.3 |
708,894 | - | -0.9 | |||
708,943 | + | +0.7 | |||
709,039 | + | -0.2 | |||
709,113 | - | ybfN | b0682 | 0.31 | +0.2 |
709,113 | - | ybfN | b0682 | 0.31 | -0.0 |
709,126 | - | ybfN | b0682 | 0.35 | -0.1 |
709,238 | + | ybfN | b0682 | 0.69 | -0.4 |
709,247 | - | ybfN | b0682 | 0.72 | -0.5 |
709,247 | - | ybfN | b0682 | 0.72 | -0.1 |
709,257 | - | ybfN | b0682 | 0.75 | +0.1 |
709,428 | - | +0.1 | |||
709,428 | - | -0.1 | |||
709,595 | + | fur | b0683 | 0.38 | -0.0 |
709,678 | - | fur | b0683 | 0.57 | -0.6 |
709,699 | + | fur | b0683 | 0.62 | -1.4 |
709,861 | - | -0.2 | |||
710,067 | - | -0.7 | |||
710,080 | + | +0.1 | |||
710,148 | - | +0.1 | |||
710,148 | - | -0.1 | |||
710,163 | - | -0.3 | |||
710,751 | + | -2.3 | |||
710,780 | - | +0.3 | |||
710,780 | - | -0.1 | |||
710,787 | + | -0.3 | |||
710,798 | + | -0.3 | |||
710,805 | - | -1.1 | |||
710,805 | - | -0.5 | |||
710,807 | + | -0.2 |
Or see this region's nucleotide sequence