Strain Fitness in Escherichia coli BW25113 around b0001

Experiment: M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
70	+				+0.2
70	+				-0.2
78	-				+0.2
78	-				+0.1
161	-				-3.4
185	-				-2.4
185	-				-2.4
208	+	thrL	b0001	0.27	-0.3
217	-	thrL	b0001	0.41	-2.8
257	-				-0.6
257	-				-3.6
440	-				-5.7
440	-				-4.3
454	-				-4.3
518	-				-3.9
518	-				-3.5
528	+				-4.3
592	+	thrA	b0002	0.10	-4.4
592	+	thrA	b0002	0.10	-3.4
666	+	thrA	b0002	0.13	-4.2
666	+	thrA	b0002	0.13	-1.4
675	-	thrA	b0002	0.14	-4.5
754	-	thrA	b0002	0.17	-5.3
754	-	thrA	b0002	0.17	-5.1
767	+	thrA	b0002	0.17	-5.2
775	-	thrA	b0002	0.18	-3.2
957	+	thrA	b0002	0.25	-4.9
957	+	thrA	b0002	0.25	-1.8
1,046	+	thrA	b0002	0.29	-4.5
1,136	-	thrA	b0002	0.32	-5.3
1,142	-	thrA	b0002	0.33	-4.3
1,161	+	thrA	b0002	0.33	-2.6
1,161	+	thrA	b0002	0.33	-3.1
1,161	+	thrA	b0002	0.33	-2.4