Strain Fitness in Escherichia coli BW25113 around b4453

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
3,697,005	-	bcsG	b3538	0.46	-0.3
3,697,005	-	bcsG	b3538	0.46	-0.2
3,697,052	+	bcsG	b3538	0.49	+0.1
3,697,061	+	bcsG	b3538	0.49	-0.2
3,697,062	+	bcsG	b3538	0.49	-0.1
3,697,067	-	bcsG	b3538	0.49	-0.0
3,697,069	-	bcsG	b3538	0.50	+0.1
3,697,072	+	bcsG	b3538	0.50	+0.4
3,697,084	+	bcsG	b3538	0.50	-0.3
3,697,116	+	bcsG	b3538	0.52	+0.1
3,697,120	+	bcsG	b3538	0.53	-0.3
3,697,128	-	bcsG	b3538	0.53	-0.7
3,697,138	-	bcsG	b3538	0.54	-1.2
3,697,326	+	bcsG	b3538	0.65	+0.7
3,697,336	+	bcsG	b3538	0.65	-0.5
3,697,339	+	bcsG	b3538	0.66	-0.8
3,697,339	+	bcsG	b3538	0.66	-1.2
3,697,344	+	bcsG	b3538	0.66	-0.5
3,697,352	-	bcsG	b3538	0.66	-0.3
3,697,395	-	bcsG	b3538	0.69	-0.2
3,697,395	-	bcsG	b3538	0.69	+0.1
3,697,401	-	bcsG	b3538	0.69	+0.4
3,697,401	-	bcsG	b3538	0.69	+0.2
3,697,408	+	bcsG	b3538	0.70	-0.1
3,697,419	-	bcsG	b3538	0.70	-0.8
3,697,433	-	bcsG	b3538	0.71	+0.2
3,697,441	-	bcsG	b3538	0.72	+0.3
3,697,441	-	bcsG	b3538	0.72	+0.4
3,697,547	-	bcsG	b3538	0.78	-0.2
3,697,560	+	bcsG	b3538	0.79	-0.1
3,697,568	-	bcsG	b3538	0.79	+0.0
3,697,570	-	bcsG	b3538	0.79	-0.7
3,697,607	+	bcsG	b3538	0.82	+1.0
3,697,607	+	bcsG	b3538	0.82	+0.2
3,697,615	+	bcsG	b3538	0.82	+0.1
3,697,615	+	bcsG	b3538	0.82	+0.1
3,697,677	+	bcsG	b3538	0.86	+0.1
3,697,736	+	bcsG	b3538	0.89	+0.1
3,697,861	+				-0.2
3,697,886	-				-1.5
3,697,886	-				-0.6
3,697,945	+				+0.1
3,697,945	+				-0.1
3,698,018	+	ldrD	b4453	0.14	+0.2
3,698,052	+	ldrD	b4453	0.45	+0.7
3,698,055	-	ldrD	b4453	0.48	+1.0
3,698,103	-				+0.9
3,698,103	-				-0.8
3,698,107	+				+0.1
3,698,158	+				-0.1
3,698,158	+				+0.5
3,698,158	+				+0.2
3,698,158	+				+0.1
3,698,165	+				-0.3
3,698,165	+				+0.5
3,698,166	-	rdlD	b4454	0.11	+0.5
3,698,178	-	rdlD	b4454	0.29	-0.1
3,698,185	+	rdlD	b4454	0.39	+0.2
3,698,190	+	rdlD	b4454	0.47	-0.1
3,698,195	+	rdlD	b4454	0.55	-0.1
3,698,195	+	rdlD	b4454	0.55	+0.7
3,698,195	+	rdlD	b4454	0.55	-1.1
3,698,195	+	rdlD	b4454	0.55	+0.2
3,698,257	-				-0.1
3,698,260	+				+0.8
3,698,277	+				+0.6
3,698,318	+				+0.2
3,698,333	+				-0.3
3,698,333	+				-0.3
3,698,340	+				+0.4
3,698,407	-				-1.4
3,698,410	+				+0.9
3,698,410	+				+0.1
3,698,410	+				+0.2
3,698,410	+				+0.6
3,698,411	+				+0.1
3,698,418	-				-0.6
3,698,418	-				-0.7
3,698,418	-				-0.3
3,698,429	-				-1.6
3,698,429	-				+0.2
3,698,429	-				-0.5
3,698,452	+				-0.3
3,698,452	-				-0.5
3,698,473	+				+0.3
3,698,474	-				+0.2
3,698,474	-				-0.1
3,698,487	+				-0.1
3,698,487	+				-0.3
3,698,501	+				+0.6
3,698,501	+				+0.4
3,698,503	+				-0.3
3,698,503	+				-0.4
3,698,507	-				-0.2
3,698,519	-				-0.3
3,698,533	-				-0.3
3,698,533	-				-0.3
3,698,533	-				+0.7
3,698,589	-				+0.2
3,698,591	+				-0.2
3,698,591	+				+1.0
3,698,593	+				-0.6
3,698,607	-				-0.3
3,698,612	-				+0.8
3,698,632	+				-1.0
3,698,632	+				+0.5
3,698,634	+				-0.8
3,698,640	+				-0.4
3,698,642	-				+0.3
3,698,660	+				-0.2
3,698,660	+				-0.5
3,698,667	+				+0.0
3,698,681	+				+0.1
3,698,681	+				-0.4
3,698,683	+				+0.5
3,698,683	+				-0.3
3,698,689	+				+0.1
3,698,690	-				+0.1
3,698,691	+				-1.1
3,698,691	+				-0.3
3,698,693	+				-0.2
3,698,694	-				+0.3
3,698,696	-				+1.2
3,698,696	-				-1.1
3,698,699	-				+0.5
3,698,699	-				+0.2
3,698,699	-				-0.0
3,698,701	-				+0.6
3,698,715	-	yhjV	b3539	0.10	+0.2
3,698,755	-	yhjV	b3539	0.13	-0.1
3,698,760	+	yhjV	b3539	0.14	-0.6
3,698,760	-	yhjV	b3539	0.14	+0.2
3,698,760	-	yhjV	b3539	0.14	+1.0
3,698,761	-	yhjV	b3539	0.14	+0.0
3,698,761	-	yhjV	b3539	0.14	+0.6
3,698,765	+	yhjV	b3539	0.14	+0.3
3,698,765	+	yhjV	b3539	0.14	+0.0
3,698,765	+	yhjV	b3539	0.14	+0.3
3,698,765	+	yhjV	b3539	0.14	+0.7
3,698,765	+	yhjV	b3539	0.14	+0.2
3,698,773	-	yhjV	b3539	0.15	+0.4
3,698,773	-	yhjV	b3539	0.15	-1.0
3,698,773	-	yhjV	b3539	0.15	-0.2
3,698,773	-	yhjV	b3539	0.15	+0.5
3,698,775	+	yhjV	b3539	0.15	-0.1
3,698,783	+	yhjV	b3539	0.15	+1.0
3,698,783	-	yhjV	b3539	0.15	-0.0
3,698,783	-	yhjV	b3539	0.15	+0.7
3,698,783	-	yhjV	b3539	0.15	+1.2
3,698,822	+	yhjV	b3539	0.19	-0.1
3,698,847	+	yhjV	b3539	0.21	-0.1
3,698,850	-	yhjV	b3539	0.21	-0.4
3,698,850	-	yhjV	b3539	0.21	-0.1
3,698,856	-	yhjV	b3539	0.21	-0.1
3,698,909	-	yhjV	b3539	0.25	-0.2
3,698,909	-	yhjV	b3539	0.25	+0.9
3,698,920	+	yhjV	b3539	0.26	-1.2
3,698,925	+	yhjV	b3539	0.27	+0.6
3,698,925	+	yhjV	b3539	0.27	-1.1
3,699,046	+	yhjV	b3539	0.36	-0.1
3,699,046	+	yhjV	b3539	0.36	-0.1
3,699,054	-	yhjV	b3539	0.37	+0.1
3,699,102	-	yhjV	b3539	0.41	+0.3
3,699,102	-	yhjV	b3539	0.41	+0.2
3,699,102	-	yhjV	b3539	0.41	+0.7