Strain Fitness in Escherichia coli BW25113 around b3766

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
3,947,409	-	yifB	b3765	0.62	-0.4
3,947,423	-	yifB	b3765	0.63	-0.5
3,947,423	-	yifB	b3765	0.63	-0.0
3,947,423	-	yifB	b3765	0.63	-0.2
3,947,429	+	yifB	b3765	0.63	-0.3
3,947,429	+	yifB	b3765	0.63	-0.3
3,947,437	-	yifB	b3765	0.63	-0.0
3,947,449	-	yifB	b3765	0.64	+0.2
3,947,449	-	yifB	b3765	0.64	-0.4
3,947,479	-	yifB	b3765	0.66	-0.5
3,947,481	+	yifB	b3765	0.66	+0.0
3,947,506	-	yifB	b3765	0.68	+0.2
3,947,506	-	yifB	b3765	0.68	-0.1
3,947,523	+	yifB	b3765	0.69	-0.2
3,947,523	+	yifB	b3765	0.69	+0.5
3,947,532	-	yifB	b3765	0.70	+0.1
3,947,543	+	yifB	b3765	0.70	-1.1
3,947,543	+	yifB	b3765	0.70	-0.1
3,947,746	+	yifB	b3765	0.84	-0.5
3,947,833	-	yifB	b3765	0.89	-0.2
3,947,836	-	yifB	b3765	0.90	+0.3
3,947,841	+				-0.3
3,947,903	+				+0.6
3,947,903	+				+0.0
3,947,984	-				+0.1
3,948,303	+				-0.8
3,948,305	+				-0.8
3,948,364	+	ilvL	b3766	0.19	-0.6
3,948,375	+	ilvL	b3766	0.30	+0.8
3,948,383	-	ilvL	b3766	0.38	-1.3
3,948,410	+	ilvL	b3766	0.66	+1.1
3,948,410	+	ilvL	b3766	0.66	+1.0
3,948,410	+	ilvL	b3766	0.66	-0.1
3,948,531	-				-1.5
3,948,579	+				-0.3
3,948,580	+				+0.7
3,948,580	+				-0.3
3,948,604	+				+0.3
3,948,604	+				-0.6
3,948,620	+				+0.4
3,948,620	+				-0.1
3,948,624	+				+0.0
3,948,633	-				-2.4
3,948,633	-				-2.1
3,948,633	-				-1.7
3,948,682	+				-1.2
3,948,721	+				+0.9
3,948,726	+				+0.5
3,948,748	+	ilvG	b4488	0.10	-1.5
3,948,748	+	ilvG	b4488	0.10	-1.8
3,948,781	+	ilvG	b4488	0.12	-0.6
3,948,815	+	ilvG	b4488	0.14	+0.1
3,948,815	+	ilvG	b4488	0.14	-0.1
3,948,851	+	ilvG	b4488	0.16	+0.1
3,948,851	+	ilvG	b4488	0.16	-0.2
3,948,851	+	ilvG	b4488	0.16	-0.7
3,948,859	-	ilvG	b4488	0.17	-1.6
3,948,933	+	ilvG	b4488	0.21	+0.5
3,948,939	+	ilvG	b4488	0.22	+0.0
3,948,944	+	ilvG	b4488	0.22	+0.6
3,948,947	-	ilvG	b4488	0.22	-1.5
3,948,947	-	ilvG	b4488	0.22	-1.9
3,948,966	-	ilvG	b4488	0.23	-1.9
3,949,037	-	ilvG	b4488	0.28	-1.8
3,949,042	-	ilvG	b4488	0.28	-2.2
3,949,083	+	ilvG	b4488	0.30	+0.2
3,949,083	+	ilvG	b4488	0.30	+0.7
3,949,136	+	ilvG	b4488	0.34	-0.0
3,949,136	+	ilvG	b4488	0.34	+0.4
3,949,150	+	ilvG	b4488	0.34	-0.2
3,949,150	+	ilvG	b4488	0.34	+0.9
3,949,219	+	ilvG	b4488	0.39	-0.5
3,949,265	+	ilvG	b4488	0.41	+0.5
3,949,308	-	ilvG	b4488	0.44	-1.5
3,949,330	-	ilvG	b4488	0.45	-1.9
3,949,360	+	ilvG	b4488	0.47	+0.5
3,949,360	+	ilvG	b4488	0.47	+0.1
3,949,368	-	ilvG	b4488	0.48	-1.0
3,949,370	-	ilvG	b4488	0.48	-1.3
3,949,438	-	ilvG	b4488	0.52	-2.3
3,949,443	+	ilvG	b4488	0.52	+0.5
3,949,443	+	ilvG	b4488	0.52	+0.3
3,949,443	+	ilvG	b4488	0.52	+0.5
3,949,443	+	ilvG	b4488	0.52	+0.5