Strain Fitness in Escherichia coli BW25113 around b3557

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
3,717,786	+				+0.1
3,717,805	+				-1.1
3,717,908	+				+1.6
3,717,914	-				-0.2
3,718,170	+				-1.6
3,718,267	+				-0.1
3,718,419	+				-0.5
3,718,476	-				+0.4
3,718,506	+				-0.4
3,718,507	+				+0.9
3,718,507	+				+1.9
3,718,507	+				+0.9
3,718,507	+				+0.9
3,718,514	-				+0.5
3,718,514	-				-0.3
3,718,514	-				-0.2
3,718,515	-				-0.0
3,718,515	-				+0.8
3,718,515	-				+0.1
3,718,516	-				+0.0
3,718,555	-				+0.3
3,718,555	-				+0.4
3,718,567	+				+0.3
3,718,624	+	mokA	b4647	0.83	+0.3
3,718,624	+	mokA	b4647	0.83	+0.3
3,718,636	+	mokA	b4647	0.89	+1.9
3,718,636	+	mokA	b4647	0.89	+1.9
3,718,638	+				+0.9
3,718,652	+				+0.0
3,718,652	+				+2.5
3,718,652	+				-0.4
3,718,667	+				+0.3
3,718,668	+				+1.0
3,718,756	+	insJ	b3557	0.10	+1.1
3,718,756	+	insJ	b3557	0.10	+0.4
3,718,763	+	insJ	b3557	0.11	+1.0
3,718,792	+	insJ	b3557	0.17	+0.4
3,718,794	+	insJ	b3557	0.17	+0.2
3,718,804	+	insJ	b3557	0.19	+0.5
3,718,821	+	insJ	b3557	0.23	+0.3
3,718,821	+	insJ	b3557	0.23	+0.4
3,718,827	+	insJ	b3557	0.24	+0.4
3,718,837	+				+1.9
3,718,936	+	insJ	b3557	0.45	-0.6
3,718,966	+	insJ	b3557	0.50	+0.7
3,718,966	+	insJ	b3557	0.50	+0.3
3,718,986	+	insJ	b3557	0.54	+1.1
3,719,018	+	insJ	b3557	0.60	-0.0
3,719,053	-	insJ	b3557	0.67	+0.6
3,719,105	+	insJ	b3557	0.77	+0.2
3,719,113	+	insJ	b3557	0.79	+0.1
3,719,266	+				+0.0
3,719,283	-				-0.0
3,719,334	+	insK	b3558	0.13	-0.1
3,719,337	+	insK	b3558	0.14	+0.1
3,719,337	+	insK	b3558	0.14	+0.1
3,719,337	+	insK	b3558	0.14	-0.7
3,719,337	+	insK	b3558	0.14	-0.0
3,719,400	-	insK	b3558	0.21	-0.4
3,719,408	-	insK	b3558	0.22	-0.0
3,719,408	-	insK	b3558	0.22	-0.1
3,719,408	-	insK	b3558	0.22	+0.1
3,719,413	-	insK	b3558	0.23	-0.1
3,719,431	-	insK	b3558	0.25	+0.3
3,719,431	-	insK	b3558	0.25	-0.1
3,719,445	+	insK	b3558	0.26	+0.2
3,719,466	+	insK	b3558	0.29	+0.6
3,719,476	-	insK	b3558	0.30	-0.5
3,719,493	+	insK	b3558	0.32	+0.2
3,719,499	+	insK	b3558	0.33	+0.8
3,719,512	-	insK	b3558	0.34	+0.0
3,719,514	+	insK	b3558	0.34	-1.8
3,719,514	+	insK	b3558	0.34	+0.9
3,719,520	-	insK	b3558	0.35	+1.2
3,719,520	-	insK	b3558	0.35	+0.8
3,719,522	+	insK	b3558	0.35	+0.1
3,719,531	-	insK	b3558	0.36	-0.3
3,719,531	-	insK	b3558	0.36	+0.0
3,719,531	-	insK	b3558	0.36	+0.6
3,719,533	+	insK	b3558	0.37	+0.3
3,719,533	+	insK	b3558	0.37	-0.3
3,719,535	-	insK	b3558	0.37	+0.1
3,719,543	+	insK	b3558	0.38	+0.6
3,719,545	+	insK	b3558	0.38	+0.4
3,719,570	+	insK	b3558	0.41	+0.4
3,719,570	+	insK	b3558	0.41	+0.6
3,719,584	+	insK	b3558	0.43	+0.2
3,719,611	+	insK	b3558	0.46	+0.3
3,719,637	+	insK	b3558	0.49	+0.1
3,719,648	+	insK	b3558	0.50	-0.9
3,719,648	+	insK	b3558	0.50	+0.3
3,719,650	+	insK	b3558	0.50	+0.3
3,719,673	+	insK	b3558	0.53	+0.2
3,719,680	+	insK	b3558	0.54	-0.0
3,719,697	-	insK	b3558	0.56	-0.8
3,719,701	+	insK	b3558	0.56	+0.0
3,719,701	-	insK	b3558	0.56	-0.9
3,719,701	-	insK	b3558	0.56	-0.9
3,719,722	-	insK	b3558	0.59	+1.2
3,719,756	-	insK	b3558	0.63	+2.9
3,719,762	+	insK	b3558	0.63	-0.1
3,719,765	+	insK	b3558	0.64	+0.3
3,719,768	+	insK	b3558	0.64	+0.0
3,719,770	+	insK	b3558	0.64	+0.6
3,719,770	+	insK	b3558	0.64	+0.0
3,719,770	+	insK	b3558	0.64	+0.3
3,719,770	+	insK	b3558	0.64	+0.4
3,719,770	+	insK	b3558	0.64	+0.0
3,719,770	+	insK	b3558	0.64	-0.3
3,719,772	+	insK	b3558	0.65	-0.1
3,719,772	+	insK	b3558	0.65	+0.2
3,719,772	+	insK	b3558	0.65	-0.2
3,719,772	+	insK	b3558	0.65	+0.7
3,719,776	-	insK	b3558	0.65	-0.7
3,719,776	-	insK	b3558	0.65	+1.9
3,719,778	-	insK	b3558	0.65	+0.3
3,719,778	-	insK	b3558	0.65	+1.1
3,719,780	+	insK	b3558	0.66	-0.4
3,719,780	+	insK	b3558	0.66	+0.3
3,719,780	+	insK	b3558	0.66	+0.4
3,719,780	+	insK	b3558	0.66	+0.0
3,719,780	-	insK	b3558	0.66	+0.7
3,719,782	+	insK	b3558	0.66	+0.1
3,719,782	+	insK	b3558	0.66	+0.3
3,719,782	+	insK	b3558	0.66	+0.5
3,719,782	+	insK	b3558	0.66	+0.0
3,719,786	+	insK	b3558	0.66	-0.0
3,719,786	+	insK	b3558	0.66	+0.2
3,719,787	+	insK	b3558	0.66	+0.1
3,719,788	+	insK	b3558	0.67	-1.5
3,719,790	-	insK	b3558	0.67	+0.7
3,719,790	-	insK	b3558	0.67	+0.7
3,719,790	-	insK	b3558	0.67	+1.9
3,719,790	-	insK	b3558	0.67	-0.7
3,719,793	+	insK	b3558	0.67	+0.2
3,719,795	-	insK	b3558	0.67	+1.9
3,719,796	+	insK	b3558	0.67	+0.4
3,719,816	+	insK	b3558	0.70	+0.4
3,719,816	+	insK	b3558	0.70	+0.8
3,719,869	+	insK	b3558	0.76	+0.2
3,719,870	+	insK	b3558	0.76	+0.1
3,719,884	+	insK	b3558	0.78	-0.4
3,719,884	+	insK	b3558	0.78	+0.3
3,719,884	+	insK	b3558	0.78	-0.1
3,719,887	-	insK	b3558	0.78	+0.9
3,719,887	-	insK	b3558	0.78	+1.9
3,719,894	+	insK	b3558	0.79	+0.2
3,719,894	+	insK	b3558	0.79	+1.1
3,719,906	+	insK	b3558	0.80	-0.6
3,719,906	+	insK	b3558	0.80	-0.3
3,719,906	+	insK	b3558	0.80	+0.6
3,719,906	+	insK	b3558	0.80	+0.1
3,719,906	+	insK	b3558	0.80	-0.1
3,719,921	+	insK	b3558	0.82	+0.1
3,719,931	+	insK	b3558	0.83	-0.1
3,719,936	+	insK	b3558	0.84	-0.4
3,719,937	+	insK	b3558	0.84	-1.4
3,719,937	+	insK	b3558	0.84	-2.4
3,719,942	+	insK	b3558	0.85	-0.1
3,719,944	+	insK	b3558	0.85	-0.1
3,719,948	+	insK	b3558	0.85	+1.2
3,719,948	+	insK	b3558	0.85	+0.6
3,719,963	+	insK	b3558	0.87	-0.2
3,719,963	+	insK	b3558	0.87	+0.3
3,719,996	+				-0.3
3,720,051	+				+0.9
3,720,059	-				-1.6
3,720,059	-				+0.1
3,720,062	-				-0.1
3,720,065	+				-0.3
3,720,065	+				+0.9
3,720,065	+				+0.9
3,720,073	-				+0.9
3,720,073	-				+0.9
3,720,073	-				+0.5
3,720,073	-				+1.9
3,720,073	-				+0.6
3,720,073	-				-1.8
3,720,094	+				+0.5
3,720,094	+				+1.6
3,720,102	-	sokA	b4614	0.10	+0.5
3,720,102	-	sokA	b4614	0.10	-0.4
3,720,102	-	sokA	b4614	0.10	-0.0
3,720,102	-	sokA	b4614	0.10	-0.5
3,720,102	-	sokA	b4614	0.10	-0.1
3,720,102	-	sokA	b4614	0.10	+0.4
3,720,115	-	sokA	b4614	0.53	+0.2
3,720,115	-	sokA	b4614	0.53	-1.6
3,720,115	-	sokA	b4614	0.53	-0.7
3,720,115	-	sokA	b4614	0.53	+0.6
3,720,160	-				-0.4
3,720,169	+				+1.1
3,720,169	+				+0.2
3,720,175	+				-0.6
3,720,183	-				+1.9
3,720,187	-				+0.3
3,720,187	-				-0.7