Strain Fitness in Escherichia coli BW25113 around b1739
Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source D-Mannitol 5 mM |
---|---|---|---|---|---|
remove | |||||
1,818,975 | + | chbC | b1737 | 0.81 | +0.5 |
1,819,023 | + | chbC | b1737 | 0.84 | +0.9 |
1,819,024 | + | chbC | b1737 | 0.84 | +0.1 |
1,819,115 | + | -0.9 | |||
1,819,130 | - | +1.1 | |||
1,819,130 | - | -0.5 | |||
1,819,159 | + | -1.2 | |||
1,819,368 | - | chbB | b1738 | 0.14 | -0.2 |
1,819,368 | - | chbB | b1738 | 0.14 | -0.3 |
1,819,368 | - | chbB | b1738 | 0.14 | +0.5 |
1,819,368 | - | chbB | b1738 | 0.14 | -0.0 |
1,819,368 | - | chbB | b1738 | 0.14 | +0.7 |
1,819,370 | - | chbB | b1738 | 0.15 | -0.3 |
1,819,378 | - | chbB | b1738 | 0.17 | +0.3 |
1,819,378 | - | chbB | b1738 | 0.17 | +0.6 |
1,819,378 | - | chbB | b1738 | 0.17 | -0.1 |
1,819,379 | - | chbB | b1738 | 0.17 | +0.1 |
1,819,442 | + | chbB | b1738 | 0.37 | +1.1 |
1,819,595 | - | chbB | b1738 | 0.85 | -0.0 |
1,819,595 | - | chbB | b1738 | 0.85 | -2.2 |
1,819,709 | - | +0.0 | |||
1,819,711 | - | +1.0 | |||
1,819,711 | - | +0.3 | |||
1,819,756 | - | -0.3 | |||
1,819,758 | + | +0.1 | |||
1,819,761 | - | +1.1 | |||
1,819,773 | - | +1.5 | |||
1,819,773 | - | +0.4 | |||
1,819,773 | - | -0.7 | |||
1,819,959 | + | +0.1 | |||
1,819,981 | + | osmE | b1739 | 0.12 | -0.2 |
1,819,996 | + | osmE | b1739 | 0.16 | +0.7 |
1,820,033 | - | osmE | b1739 | 0.27 | +0.7 |
1,820,215 | - | osmE | b1739 | 0.81 | +0.2 |
Or see this region's nucleotide sequence