Strain Fitness in Escherichia coli BW25113 around b1506
Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source D-Mannitol 5 mM |
---|---|---|---|---|---|
remove | |||||
1,587,459 | + | ydeT | b1505 | 0.47 | +0.0 |
1,587,508 | - | ydeT | b1505 | 0.51 | +1.0 |
1,587,508 | - | ydeT | b1505 | 0.51 | +1.0 |
1,587,612 | - | ydeT | b1505 | 0.60 | -0.6 |
1,587,612 | - | ydeT | b1505 | 0.60 | +1.0 |
1,587,647 | + | ydeT | b1505 | 0.63 | +3.0 |
1,587,730 | + | ydeT | b1505 | 0.70 | -0.6 |
1,587,851 | - | ydeT | b1505 | 0.79 | -0.6 |
1,588,339 | - | -1.7 | |||
1,588,354 | - | -1.3 | |||
1,588,406 | - | yneL | b1506 | 0.24 | +1.0 |
1,588,460 | - | yneL | b1506 | 0.50 | +2.3 |
1,588,474 | - | yneL | b1506 | 0.57 | +1.0 |
1,588,483 | - | yneL | b1506 | 0.62 | +0.7 |
1,588,483 | - | yneL | b1506 | 0.62 | +1.7 |
1,588,494 | - | yneL | b1506 | 0.67 | +1.4 |
1,588,997 | - | +0.5 | |||
1,589,129 | + | hipA | b1507 | 0.19 | -1.3 |
1,589,163 | - | hipA | b1507 | 0.22 | -0.5 |
1,589,222 | + | hipA | b1507 | 0.26 | +1.6 |
1,589,337 | - | hipA | b1507 | 0.35 | +0.5 |
Or see this region's nucleotide sequence