Strain Fitness in Escherichia coli BW25113 around b1262
Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source D-Mannitol 5 mM |
---|---|---|---|---|---|
remove | |||||
1,315,453 | + | trpB | b1261 | 0.17 | -3.1 |
1,315,671 | + | trpB | b1261 | 0.36 | -4.3 |
1,315,984 | - | trpB | b1261 | 0.62 | -3.8 |
1,316,375 | - | -3.4 | |||
1,316,375 | - | -3.5 | |||
1,316,600 | + | trpC | b1262 | 0.11 | -3.4 |
1,316,692 | + | trpC | b1262 | 0.18 | -3.5 |
1,316,692 | + | trpC | b1262 | 0.18 | -3.1 |
1,317,035 | - | trpC | b1262 | 0.43 | -0.4 |
1,317,035 | - | trpC | b1262 | 0.43 | +0.2 |
1,317,113 | - | trpC | b1262 | 0.49 | -0.3 |
1,317,144 | - | trpC | b1262 | 0.51 | -1.0 |
1,317,153 | + | trpC | b1262 | 0.52 | -4.1 |
1,317,181 | + | trpC | b1262 | 0.54 | -3.2 |
1,317,305 | - | trpC | b1262 | 0.63 | -1.0 |
1,317,389 | + | trpC | b1262 | 0.69 | -2.8 |
1,317,389 | + | trpC | b1262 | 0.69 | -4.3 |
1,317,643 | + | trpC | b1262 | 0.88 | -5.2 |
1,317,684 | - | -3.4 | |||
1,317,684 | - | -3.3 | |||
1,317,766 | - | -2.8 | |||
1,318,316 | + | trpD | b1263 | 0.32 | -4.0 |
1,318,316 | + | trpD | b1263 | 0.32 | -2.2 |
Or see this region's nucleotide sequence