Strain Fitness in Escherichia coli BW25113 around b1138
Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source D-Mannitol 5 mM |
---|---|---|---|---|---|
remove | |||||
1,195,760 | + | +1.1 | |||
1,195,807 | + | +0.2 | |||
1,195,888 | + | +0.1 | |||
1,195,894 | - | +0.3 | |||
1,195,894 | - | -0.0 | |||
1,195,894 | - | +0.3 | |||
1,195,895 | - | +0.0 | |||
1,195,895 | - | -0.4 | |||
1,195,896 | - | -1.6 | |||
1,195,896 | - | +0.3 | |||
1,195,896 | - | -0.2 | |||
1,195,932 | + | -0.9 | |||
1,195,932 | + | -0.3 | |||
1,195,938 | - | +0.0 | |||
1,195,941 | - | -0.1 | |||
1,195,944 | + | +0.7 | |||
1,195,944 | + | -0.0 | |||
1,195,954 | + | -0.0 | |||
1,195,957 | - | +0.4 | |||
1,195,961 | - | +1.2 | |||
1,195,963 | - | -0.7 | |||
1,195,972 | - | +0.2 | |||
1,195,982 | - | -0.4 | |||
1,195,985 | + | -0.3 | |||
1,196,004 | - | +0.8 | |||
1,196,045 | + | +1.2 | |||
1,196,045 | + | -1.3 | |||
1,196,054 | + | +1.2 | |||
1,196,105 | - | +1.1 | |||
1,196,127 | - | +0.2 | |||
1,197,326 | - | ymfE | b1138 | 0.81 | +0.6 |
1,197,530 | - | +1.2 | |||
1,197,781 | + | +1.2 |
Or see this region's nucleotide sequence