Strain Fitness in Escherichia coli BW25113 around b1122

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
1,179,526	+				-1.3
1,179,552	-				+1.3
1,179,584	+				-0.7
1,179,584	+				+0.1
1,179,584	+				+0.1
1,179,594	+				+0.3
1,179,758	-				-0.3
1,179,768	-				+2.3
1,179,785	+	ycfZ	b1121	0.11	+0.8
1,179,833	+	ycfZ	b1121	0.17	+0.0
1,179,837	-	ycfZ	b1121	0.17	+0.3
1,179,922	+	ycfZ	b1121	0.28	+0.3
1,179,922	+	ycfZ	b1121	0.28	+0.3
1,179,922	+	ycfZ	b1121	0.28	+1.3
1,179,922	+	ycfZ	b1121	0.28	-0.7
1,179,922	+	ycfZ	b1121	0.28	+2.3
1,179,943	+	ycfZ	b1121	0.31	+1.3
1,179,992	+	ycfZ	b1121	0.37	+1.3
1,180,234	-	ycfZ	b1121	0.67	+1.3
1,180,389	-	ycfZ	b1121	0.87	+0.3
1,180,389	-	ycfZ	b1121	0.87	-0.3
1,180,438	+				+1.3
1,180,457	+				+1.3
1,180,739	-	ymfA	b1122	0.55	+0.9
1,180,755	+	ymfA	b1122	0.58	+1.3
1,180,755	-	ymfA	b1122	0.58	-1.5
1,180,755	-	ymfA	b1122	0.58	+0.8
1,180,763	-	ymfA	b1122	0.60	-0.7
1,180,777	-	ymfA	b1122	0.63	+0.7
1,180,777	-	ymfA	b1122	0.63	+1.4
1,180,777	-	ymfA	b1122	0.63	-0.4
1,180,777	-	ymfA	b1122	0.63	+0.3
1,180,777	-	ymfA	b1122	0.63	+0.3
1,180,777	-	ymfA	b1122	0.63	+0.2
1,180,778	-	ymfA	b1122	0.63	+1.1
1,180,796	+	ymfA	b1122	0.67	-0.7
1,180,796	+	ymfA	b1122	0.67	+0.3
1,180,799	-	ymfA	b1122	0.68	+0.5
1,180,800	-	ymfA	b1122	0.68	+1.3
1,180,803	-	ymfA	b1122	0.68	+0.1
1,180,809	+	ymfA	b1122	0.70	+0.7
1,180,813	+	ymfA	b1122	0.71	+0.5
1,180,817	-	ymfA	b1122	0.71	+0.7
1,180,834	-	ymfA	b1122	0.75	+0.9
1,180,838	-	ymfA	b1122	0.76	+0.7
1,180,854	-	ymfA	b1122	0.79	+2.6
1,180,869	-	ymfA	b1122	0.83	+0.4
1,180,881	+	ymfA	b1122	0.85	+0.0
1,180,881	+	ymfA	b1122	0.85	-1.7
1,180,890	+	ymfA	b1122	0.87	-0.0
1,180,894	+	ymfA	b1122	0.88	+0.4
1,180,894	+	ymfA	b1122	0.88	+0.5
1,180,894	+	ymfA	b1122	0.88	+0.7
1,180,900	+	ymfA	b1122	0.89	+0.0
1,180,900	+	ymfA	b1122	0.89	+0.5
1,180,902	-				+0.1
1,180,908	-				-0.3
1,180,937	+				-0.2
1,180,945	-				+1.6
1,180,945	-				+0.8
1,180,953	-				-0.4
1,180,959	-				-0.2
1,180,988	-				+0.8
1,180,988	-				+0.8
1,180,989	-				+0.4
1,180,989	-				+1.6
1,181,036	-				-0.9
1,181,046	-				+0.2
1,181,101	+				-1.7
1,181,101	+				-1.7
1,181,170	-	potD	b1123	0.16	+0.8
1,181,280	-	potD	b1123	0.26	+0.8
1,181,280	-	potD	b1123	0.26	+0.3
1,181,421	+	potD	b1123	0.40	+0.2
1,181,480	-	potD	b1123	0.45	-0.4
1,181,522	-	potD	b1123	0.49	+0.3
1,181,539	+	potD	b1123	0.51	-0.1
1,181,547	-	potD	b1123	0.52	+0.3
1,181,547	-	potD	b1123	0.52	+0.8
1,181,556	+	potD	b1123	0.53	+1.6
1,181,556	+	potD	b1123	0.53	-1.6
1,181,581	-	potD	b1123	0.55	+0.1
1,181,684	-	potD	b1123	0.65	-0.1
1,181,721	-	potD	b1123	0.68	+1.7
1,181,839	-	potD	b1123	0.80	+0.6
1,181,865	-	potD	b1123	0.82	-1.1
1,181,918	+	potD	b1123	0.87	+1.1