Strain Fitness in Escherichia coli BW25113 around b1111

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
1,166,478	-	ndh	b1109	0.90	-0.3
1,166,501	-				-0.1
1,166,526	+				-0.3
1,166,573	-				-0.0
1,166,623	-				+0.1
1,166,655	+				-0.4
1,166,661	-				-0.2
1,166,824	+				+0.1
1,166,972	+	ycfJ	b1110	0.28	+0.6
1,166,972	+	ycfJ	b1110	0.28	-0.8
1,166,972	+	ycfJ	b1110	0.28	-0.6
1,166,972	+	ycfJ	b1110	0.28	+0.0
1,166,980	+	ycfJ	b1110	0.29	-0.0
1,167,051	+	ycfJ	b1110	0.42	+0.9
1,167,051	+	ycfJ	b1110	0.42	-0.1
1,167,125	+	ycfJ	b1110	0.56	+0.3
1,167,132	+	ycfJ	b1110	0.57	+0.5
1,167,132	+	ycfJ	b1110	0.57	+0.8
1,167,243	+	ycfJ	b1110	0.78	+0.6
1,167,243	+	ycfJ	b1110	0.78	+0.7
1,167,243	+	ycfJ	b1110	0.78	-0.8
1,167,251	-	ycfJ	b1110	0.79	-0.1
1,167,263	-	ycfJ	b1110	0.82	+0.3
1,167,263	-	ycfJ	b1110	0.82	+1.0
1,167,362	-				+0.4
1,167,364	+				+1.0
1,167,364	+				+1.6
1,167,640	+	ycfQ	b1111	0.34	+0.2
1,167,840	+	ycfQ	b1111	0.66	+0.1
1,167,840	-	ycfQ	b1111	0.66	+1.3
1,167,949	-	ycfQ	b1111	0.83	+0.6
1,168,045	-				-0.1
1,168,045	-				+0.3
1,168,075	-				-0.4
1,168,075	-				+0.4
1,168,746	+	ycfS	b1113	0.12	+0.1
1,168,766	+	ycfS	b1113	0.14	+1.3
1,168,802	+	ycfS	b1113	0.17	+0.3
1,168,805	+	ycfS	b1113	0.18	-0.5
1,168,870	+	ycfS	b1113	0.24	-0.7
1,168,925	-	ycfS	b1113	0.30	-0.3
1,169,013	+	ycfS	b1113	0.39	-0.3