Strain Fitness in Escherichia coli BW25113 around b0990

Experiment: Carbon source D-Mannitol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Mannitol 5 mM
1,049,781	-				+0.2
1,049,781	-				+0.2
1,049,782	-				+1.1
1,049,788	-				-0.1
1,049,795	-				-0.1
1,049,795	-				-0.1
1,049,809	-				-0.4
1,049,835	+				+0.1
1,049,835	+				-0.5
1,049,843	-				-0.8
1,049,852	-				-0.1
1,049,854	+				-0.0
1,049,854	+				+0.3
1,049,854	+				+0.3
1,049,856	+				-0.4
1,049,856	+				+1.2
1,049,857	-				+0.1
1,049,862	-				-0.3
1,049,862	-				-0.3
1,049,862	-				+1.1
1,049,918	-				+0.6
1,049,920	+				-2.2
1,049,940	-				+0.7
1,049,967	-				+0.2
1,050,022	+				-0.3
1,050,031	-				-2.9
1,050,033	-				+0.9
1,050,045	-				-0.4
1,050,049	+				+0.2
1,050,062	+				-0.6
1,050,149	+				+0.4
1,050,154	+				+0.0
1,050,164	+				+0.5
1,050,180	+				-0.4
1,050,180	+				-0.8
1,050,184	+				+0.5
1,050,184	+				-0.3
1,050,184	+				+0.6
1,050,184	+				+0.4
1,050,194	+				-0.3
1,050,194	+				-0.2
1,050,211	+	cspH	b0989	0.12	+0.7
1,050,211	+	cspH	b0989	0.12	+0.2
1,050,226	+	cspH	b0989	0.19	+1.7
1,050,254	+	cspH	b0989	0.32	+0.9
1,050,254	+	cspH	b0989	0.32	+1.3
1,050,269	+	cspH	b0989	0.39	-1.7
1,050,269	+	cspH	b0989	0.39	+0.5
1,050,277	-	cspH	b0989	0.43	+0.3
1,050,277	-	cspH	b0989	0.43	+1.3
1,050,336	+	cspH	b0989	0.70	+0.8
1,050,349	+	cspH	b0989	0.77	+1.3
1,050,398	+				+1.3
1,050,398	+				+0.3
1,050,435	-				+1.3
1,050,435	-				+1.3
1,050,516	+				+1.3
1,050,565	-				+0.3
1,050,590	+				-0.1
1,050,613	+				+0.0
1,050,613	+				+0.5
1,050,733	+	cspG	b0990	0.23	+0.3
1,050,756	-	cspG	b0990	0.34	+1.3
1,050,756	-	cspG	b0990	0.34	+1.0
1,050,883	+				-0.1
1,050,944	+				-0.4
1,050,944	+				+0.8
1,050,949	+				+0.2
1,050,949	+				+0.4
1,050,949	+				-0.1
1,050,955	-				+0.5
1,050,957	-				-0.2
1,050,970	-				+0.1
1,051,100	-	ymcE	b0991	0.13	+0.3
1,051,100	-	ymcE	b0991	0.13	-2.3
1,051,107	+	ymcE	b0991	0.16	-1.7
1,051,107	+	ymcE	b0991	0.16	+0.3
1,051,149	+	ymcE	b0991	0.34	+0.0
1,051,149	+	ymcE	b0991	0.34	-1.5
1,051,151	+	ymcE	b0991	0.35	+0.1
1,051,161	-	ymcE	b0991	0.39	+0.2
1,051,161	-	ymcE	b0991	0.39	+0.1
1,051,203	+	ymcE	b0991	0.58	+0.1
1,051,203	+	ymcE	b0991	0.58	+0.0
1,051,228	+	ymcE	b0991	0.68	-0.7
1,051,255	-	ymcE	b0991	0.80	+0.1
1,051,480	-				+0.5
1,051,591	-				+0.1
1,051,631	-	yccM	b0992	0.11	+0.1
1,051,640	+	yccM	b0992	0.12	+1.3
1,051,714	-	yccM	b0992	0.19	+0.4
1,051,717	+	yccM	b0992	0.19	-0.2
1,051,735	-	yccM	b0992	0.21	-0.0
1,051,770	-	yccM	b0992	0.24	-0.3
1,051,872	-	yccM	b0992	0.34	+0.3