Experiment: Time6-phageFRS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_1913 and PP_1914 are separated by 15 nucleotides PP_1914 and PP_1915 are separated by 203 nucleotides PP_1915 and PP_1916 are separated by 187 nucleotides
PP_1913: PP_1913 - malonyl-CoA-ACP transacylase, at 2,156,697 to 2,157,635
_1913
PP_1914: PP_1914 - 3-oxoacyl-[acyl-carrier-protein] reductase subunit, at 2,157,651 to 2,158,391
_1914
PP_1915: PP_1915 - acyl carrier protein, at 2,158,595 to 2,158,831
_1915
PP_1916: PP_1916 - beta-ketoacyl-ACP synthase II / 3-oxo-cis-vaccenoyl-[acp] synthase / FabF / KASII / acetoacetyl-[acp] synthase, at 2,159,019 to 2,160,263
_1916
Position (kb)
2157
2158
2159 Strain fitness (log2 ratio)
-1
0
1
2 at 2156.683 kb on + strand at 2156.683 kb on + strand at 2156.683 kb on + strand at 2158.389 kb on + strand at 2158.389 kb on + strand at 2158.389 kb on + strand at 2158.433 kb on + strand at 2158.456 kb on + strand at 2158.456 kb on + strand at 2158.456 kb on + strand at 2158.456 kb on + strand at 2158.456 kb on + strand at 2158.568 kb on + strand at 2158.568 kb on + strand at 2158.568 kb on + strand at 2158.568 kb on + strand at 2158.570 kb on + strand at 2158.570 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Time6-phageFRS remove 2,156,683 + -0.2 2,156,683 + +0.8 2,156,683 + -1.5 2,158,389 + +0.4 2,158,389 + +1.3 2,158,389 + -0.6 2,158,433 + -0.3 2,158,456 + -1.6 2,158,456 + -0.7 2,158,456 + -1.2 2,158,456 + +0.3 2,158,456 + +0.0 2,158,568 + +0.8 2,158,568 + +1.8 2,158,568 + +1.0 2,158,568 + -1.7 2,158,570 + -0.7 2,158,570 + -0.5
Or see this region's nucleotide sequence