Strain Fitness in Pseudomonas putida KT2440 around PP_5410

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1
6,172,395	-		PP_5410	0.12	+0.1
6,172,395	-		PP_5410	0.12	+0.2
6,172,395	-		PP_5410	0.12	-0.1
6,172,395	-		PP_5410	0.12	-1.1
6,172,395	-		PP_5410	0.12	+0.1
6,172,398	-		PP_5410	0.12	+0.4
6,172,398	-		PP_5410	0.12	-0.2
6,172,398	-		PP_5410	0.12	+0.2
6,172,533	-		PP_5410	0.29	-0.2
6,172,533	-		PP_5410	0.29	-0.3
6,172,533	-		PP_5410	0.29	-0.4
6,172,533	-		PP_5410	0.29	-0.0
6,172,533	-		PP_5410	0.29	+0.8
6,172,533	-		PP_5410	0.29	-0.7
6,172,592	-		PP_5410	0.37	+0.8
6,172,797	-		PP_5410	0.63	-0.2
6,172,797	-		PP_5410	0.63	-0.3
6,172,797	-		PP_5410	0.63	+0.2
6,172,916	-		PP_5410	0.79	+0.3
6,173,014	-				-0.8
6,173,014	-				+0.2
6,173,014	-				-0.7
6,173,014	-				+0.2
6,173,046	-				-0.1
6,173,046	-				-0.9
6,173,046	-				-0.5
6,173,046	-				+0.3
6,173,046	-				-1.5
6,173,046	-				-0.2
6,173,046	-				+0.1
6,173,046	-				-0.2
6,173,194	+				-1.0
6,173,194	+				-0.4
6,173,194	+				+1.2
6,173,194	+				-0.6
6,173,195	-				+0.2
6,173,195	-				+0.1
6,173,195	-				+0.2
6,173,196	+				-0.5
6,173,196	+				+3.6
6,173,197	-				-0.0
6,173,228	+				-0.3
6,173,228	+				+0.9
6,173,228	+				-0.1
6,173,236	+				+0.6
6,173,237	-				+0.1
6,173,237	-				-0.4