Strain Fitness in Pseudomonas putida KT2440 around PP_5668

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 2
4,814,656	+		PP_4240	0.19	+0.4
4,814,772	+		PP_4240	0.28	+0.4
4,814,864	+		PP_4240	0.36	+0.0
4,814,897	+		PP_4240	0.39	+0.5
4,815,084	-		PP_4240	0.54	-0.6
4,815,125	-		PP_4240	0.58	-0.8
4,815,130	-		PP_4240	0.58	-0.7
4,815,130	-		PP_4240	0.58	+0.7
4,815,181	-		PP_4240	0.62	-0.2
4,815,657	+				-1.1
4,815,756	+		PP_5668	0.17	-0.6
4,815,757	-		PP_5668	0.17	-0.2
4,815,797	+		PP_5668	0.22	+0.0
4,815,797	+		PP_5668	0.22	-1.3
4,815,797	+		PP_5668	0.22	-0.9
4,815,821	+		PP_5668	0.25	+0.2
4,815,822	-		PP_5668	0.26	+0.6
4,815,822	-		PP_5668	0.26	-0.3
4,815,827	+		PP_5668	0.26	-1.8
4,815,828	-		PP_5668	0.26	+0.5
4,815,828	-		PP_5668	0.26	+0.7
4,815,866	+		PP_5668	0.31	-0.1
4,815,911	+		PP_5668	0.38	+0.0
4,815,991	-		PP_5668	0.48	-0.1
4,815,991	-		PP_5668	0.48	+0.3
4,816,047	-		PP_5668	0.56	-0.3
4,816,074	-		PP_5668	0.59	+0.0
4,816,389	+				+0.5
4,816,452	-		PP_5669	0.11	+0.9
4,816,617	+		PP_5669	0.34	-0.2
4,816,727	-		PP_5669	0.50	-0.1
4,816,765	+		PP_5669	0.56	-0.9
4,816,783	+		PP_5669	0.58	+0.6
4,816,808	+		PP_5669	0.62	-0.1
4,816,871	-		PP_5669	0.71	-0.0
4,816,872	+		PP_5669	0.71	-0.1
4,816,872	+		PP_5669	0.71	+0.6
4,816,873	-		PP_5669	0.71	-0.4
4,816,873	-		PP_5669	0.71	+0.3
4,816,874	+		PP_5669	0.71	-0.6
4,816,922	+		PP_5669	0.78	+0.5
4,816,970	-		PP_5669	0.85	-0.2
4,817,062	-				+1.1
4,817,272	-				-0.3
4,817,275	+				+0.7