Strain Fitness in Pseudomonas putida KT2440 around PP_3737

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1
4,263,879	+		PP_3736	0.16	-0.0
4,264,012	-		PP_3736	0.28	-0.0
4,264,105	-		PP_3736	0.37	+0.3
4,264,182	+		PP_3736	0.44	+0.2
4,264,183	-		PP_3736	0.44	-0.2
4,264,183	-		PP_3736	0.44	-0.0
4,264,183	-		PP_3736	0.44	-1.4
4,264,382	+		PP_3736	0.63	-0.4
4,264,382	+		PP_3736	0.63	-0.0
4,264,383	-		PP_3736	0.63	+0.5
4,264,383	-		PP_3736	0.63	+0.2
4,264,383	-		PP_3736	0.63	-0.2
4,264,408	+		PP_3736	0.66	+0.2
4,264,451	+		PP_3736	0.70	-0.3
4,264,452	-		PP_3736	0.70	-0.3
4,264,452	-		PP_3736	0.70	+1.0
4,264,452	-		PP_3736	0.70	-0.4
4,264,452	-		PP_3736	0.70	-0.1
4,264,496	+		PP_3736	0.74	+0.0
4,264,496	+		PP_3736	0.74	-0.3
4,264,502	+		PP_3736	0.74	-0.2
4,264,502	+		PP_3736	0.74	+0.1
4,264,502	+		PP_3736	0.74	+0.8
4,264,503	-		PP_3736	0.74	-0.5
4,264,503	-		PP_3736	0.74	+0.2
4,264,503	-		PP_3736	0.74	+0.2
4,264,503	-		PP_3736	0.74	+0.2
4,264,509	+		PP_3736	0.75	+0.0
4,264,509	+		PP_3736	0.75	-0.2
4,264,801	+				+0.3
4,264,807	+				-0.4
4,264,833	-				+0.0
4,264,833	-				-0.2
4,264,935	+		PP_3737	0.15	-0.8
4,264,935	+		PP_3737	0.15	-0.4
4,264,935	+		PP_3737	0.15	-0.7
4,264,971	+		PP_3737	0.19	-0.4
4,264,972	-		PP_3737	0.19	-0.2
4,265,057	+		PP_3737	0.28	+0.5
4,265,196	+		PP_3737	0.43	-0.4
4,265,196	+		PP_3737	0.43	+0.4
4,265,196	+		PP_3737	0.43	+0.3
4,265,197	-		PP_3737	0.43	+0.2
4,265,197	-		PP_3737	0.43	+0.2
4,265,197	-		PP_3737	0.43	-0.0
4,265,197	-		PP_3737	0.43	-0.4
4,265,349	+		PP_3737	0.59	-0.1
4,265,349	+		PP_3737	0.59	-0.1
4,265,349	+		PP_3737	0.59	+0.4
4,265,349	+		PP_3737	0.59	+0.1
4,265,349	+		PP_3737	0.59	-0.0
4,265,350	-		PP_3737	0.59	-0.4
4,265,350	-		PP_3737	0.59	+0.1
4,265,350	-		PP_3737	0.59	+0.1
4,265,350	-		PP_3737	0.59	-0.2
4,265,350	-		PP_3737	0.59	+0.0
4,265,350	-		PP_3737	0.59	-0.3
4,265,350	-		PP_3737	0.59	+0.1
4,265,353	+		PP_3737	0.59	+0.7
4,265,353	+		PP_3737	0.59	-0.2
4,265,353	+		PP_3737	0.59	-0.2
4,265,354	-		PP_3737	0.60	+0.2
4,265,561	+		PP_3737	0.81	-0.2
4,265,562	-		PP_3737	0.81	-0.1
4,265,810	-				+0.4
4,265,903	+		PP_3738	0.22	+0.3
4,265,903	+		PP_3738	0.22	-0.6
4,265,904	-		PP_3738	0.22	-0.4
4,265,904	-		PP_3738	0.22	+0.1
4,266,073	+		PP_3738	0.46	-0.8
4,266,074	-		PP_3738	0.46	-0.2
4,266,492	+				+0.0
4,266,526	+				+0.7
4,266,526	+				-0.2
4,266,526	+				-0.7
4,266,526	+				-0.0
4,266,527	-				-0.3
4,266,605	+				-0.1
4,266,621	-				-0.2
4,266,621	-				+0.2
4,266,728	+				+0.2
4,266,728	+				-0.1
4,266,728	+				+0.2
4,266,729	-				+0.2
4,266,729	-				+0.3
4,266,729	-				-0.5